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Assessing the performance of QSP models: biology as the driver for validation
Fulya Akpinar Singh1, Nasrin Afzal1, Shepard J Smithline1
1Genmab US, Inc., 777 Scudders Mill Rd Bldg 2 4th Floor, Plainsboro, NJ, 08536, USA.
Quantitative systems pharmacology (QSP) model validation needs a nuanced approach beyond standard statistical methods. This review clarifies QSP validation levels and their context-dependent sufficiency for building confidence in mechanistic models.
Area of Science:
- Pharmacology
- Computational Biology
- Systems Biology
Background:
- Model validation is crucial for quantitative model confidence.
- Quantitative systems pharmacology (QSP) lacks standardized validation processes.
- Classical statistical validation may not fully address QSP mechanistic models.
Purpose of the Study:
- To review current QSP validation concepts.
- To contrast statistical validation aims with QSP challenges.
- To define QSP validation stages for contextual application.
Main Methods:
- Literature review of QSP validation practices.
- Comparison of statistical validation (inference, pharmacometrics, machine learning) with QSP needs.
- Analysis of published QSP models to illustrate validation levels.
Main Results:
- Current QSP validation is often piecemeal.
- Mechanistic model validation requires a tailored approach.
- Different validation levels exist, applicable based on analytical context.
Conclusions:
- A nuanced, context-specific approach to QSP model validation is necessary.
- Understanding validation stages enhances confidence in QSP model application.
- Standardized yet flexible validation frameworks are needed for QSP.
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