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qKAT: Quantitative Semi-automated Typing of Killer-cell Immunoglobulin-like Receptor Genes
Published on: March 6, 2019
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Polymorphic KIR3DL3 expression modulates tissue-resident and innate-like T cells.
William H Palmer1,2, Laura Ann Leaton1,2, Ana Campos Codo1,2
1Department of Biomedical Informatics, University of Colorado School of Medicine, Aurora, CO, USA.
Science Immunology
|June 30, 2023
Summary
Killer cell immunoglobulin-like receptor 3DL3 (KIR3DL3) is mainly found in T cells, not NK cells, and can inhibit T cell function. KIR3DL3 expression varies, impacting immune checkpoint therapies.
Area of Science:
- Immunology
- Cell Biology
- Molecular Biology
Background:
- Killer cell immunoglobulin-like receptors (KIR) typically function on natural killer (NK) cells, recognizing HLA class I ligands.
- KIR3DL3, an inhibitory KIR, binds the B7 family ligand HHLA2 and is a target for immune checkpoint inhibition.
- The expression and function of KIR3DL3 have remained largely uncharacterized.
Purpose of the Study:
- To investigate the expression profile and biological function of KIR3DL3.
- To determine the cellular distribution and characteristics of KIR3DL3-expressing cells.
- To explore the implications of KIR3DL3 expression and its variants for immune checkpoint targeting.
Main Methods:
- Extensive transcriptomic analysis to identify KIR3DL3 expression.
- High-resolution flow cytometry and single-cell transcriptomics to characterize KIR3DL3+ T cells.
- Analysis of T cell receptor (TCR) usage and functional assays including KIR3DL3 ligation.
Main Results:
- KIR3DL3 is highly expressed in γδ and CD8+ T cells, not NK cells, with enriched presence in the lungs and digestive tract.
- KIR3DL3+ T cells exhibit an activated transitional memory phenotype and reduced functionality.
- TCR-mediated T cell stimulation can be inhibited by KIR3DL3 ligation, and certain genetic variants affect KIR3DL3 expression levels.
Conclusions:
- KIR3DL3 is upregulated during unconventional T cell activation and its expression is variable among individuals.
- Findings suggest KIR3DL3 plays a role in T cell regulation and has implications for personalized KIR3DL3/HHLA2 immune checkpoint inhibition strategies.
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