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Author Spotlight: Integrated Multi-Omics Analysis for Unveiling Multicellular Immune Signatures in Clinical Heart Attack Cohorts
Published on: September 20, 2024
Exploring an immune cells-related molecule in STEMI by bioinformatics analysis
Min Zhang1, Jiaxing Li2, Cuncun Hua3
1Department of Research Ward, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Insights
Researchers identified Adrenomedullin (ADM) as a novel serum biomarker for ST-elevated myocardial infarction (STEMI). ADM shows potential in diagnosing heart attacks and understanding their immune-related mechanisms.
Area of Science:
- Cardiology
- Immunology
- Bioinformatics
Background:
- ST-elevated myocardial infarction (STEMI) remains a leading cause of global mortality.
- Despite advances, long-term prognosis for heart attack survivors is poor.
- Understanding STEMI pathogenesis, particularly immune molecular mechanisms, is crucial.
Purpose of the Study:
- To identify novel serum biomarkers for STEMI.
- To explore potential new immune-related mechanisms underlying STEMI.
- To utilize bioinformatics for analyzing gene expression in STEMI patients.
Main Methods:
- Analysis of gene expression profiles from the Gene Expression Omnibus (GEO) database.
- Application of differential gene analysis and machine learning algorithms.
- Immune cell infiltration analysis and correlation studies using R software.
Main Results:
- Identified 146 differentially expressed genes (DEGs) between STEMI and coronary artery disease (CAD) groups.
- Discovered significant differential infiltration of eleven immune cell types.
- Screened 25 DEGs correlated with monocytes and neutrophils, identifying ADM as a hub gene biomarker with >80% accuracy.
Conclusions:
- ADM emerges as a promising diagnostic biomarker for STEMI.
- ADM's positive correlation with monocytes and neutrophils suggests a role in STEMI's immune response.
- Findings offer insights into STEMI pathogenesis and potential new diagnostic/therapeutic strategies.
Background:
ST-elevated myocardial infarction (STEMI) is the leading cause of mortality worldwide. The mortality rate of heart attacks has decreased due to various preventive factors and the development of early diagnostic resuscitation measures, but the long-term prognosis remains poor. The present study aimed to identify novel serum biomarkers in STEMI patients and explored a possible new mechanism of STEMI from an immune molecular angle with bioinformatics analysis.
Methods:
Gene expression profiles were obtained from Gene Expression Omnibus (GEO) database. Differential gene analysis, machine learning algorithms, gene set enrichment analysis, and immune cell infiltration analysis were conducted using R software.
Results:
We identified 146 DEGs (differentially expressed genes) in the integrated dataset between the STEMI and CAD (coronary artery disease) groups. Immune infiltration analysis indicated that eleven cell types were differentially infiltrated. Through correlation analysis, we further screened 25 DEGs that showed a high correlation with monocytes and neutrophils. Afterwards, five genes consistently selected by all three machine learning algorithms were considered candidate genes. Finally, we identified a hub gene (ADM) as a biomarker of STEMI. AUC curves showed that ADM had more than 80% high accuracy in all datasets.
Conclusions:
In this study, we explored a potentially new mechanism of STEMI from an immune molecular perspective, which might provide insights into the pathogenesis of STEMI. ADM positively correlated with monocytes and neutrophils, suggesting its potential role in the immune response during STEMI. Additionally, we validated the diagnostic performance of ADM in two external datasets, which could help to develop new diagnostic tools or therapeutic strategies.
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