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Updated: Jul 24, 2025

Cell Type-specific Gene Expression Profiling in the Mouse Liver
Published on: September 17, 2019
Transcriptome sequencing and experiments reveal the effect of formyl peptide receptor 2 on liver homeostasis
Hui Liu1, Ze-Yu Sun2, Hua Jiang2
1Department of Gastroenterology, Second Hospital of Dalian Medical University, Dalian 116000, Liaoning Province, China.
Background:
Formyl peptide receptor 2 (Fpr2) is an important receptor in host resistance to bacterial infections. In previous studies, we found that the liver of Fpr2-/- mice is the most severely damaged target organ in bloodstream infections, although the reason for this is unclear.
Aim:
To investigate the role of Fpr2 in liver homeostasis and host resistance to bacterial infections.
Methods:
Transcriptome sequencing was performed on the livers of Fpr2-/- and wild-type (WT) mice. Differentially expressed genes (DEGs) were identified in the Fpr2-/- and WT mice, and the biological functions of DEGs were analyzed by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) en-richment analysis. Quantitative real time-polymerase chain reaction (qRT-PCR) and western blot (WB) analyses were used to further validate the expression levels of differential genes. Cell counting kit-8 assay was employed to investigate cell survival. The cell cycle detection kit was used to measure the distribution of cell cycles. The Luminex assay was used to analyze cytokine levels in the liver. The serum biochemical indices and the number of neutrophils in the liver were measured, and hepatic histopathological analysis was performed.
Results:
Compared with the WT group, 445 DEGs, including 325 upregulated genes and 120 downregulated genes, were identified in the liver of Fpr2-/- mice. The enrichment analysis using GO and KEGG showed that these DEGs were mainly related to cell cycle. The qRT-PCR analysis confirmed that several key genes (CycA, CycB1, Cdc20, Cdc25c, and Cdk1) involved in the cell cycle had significant changes. The WB analysis confirmed a decrease in the expression of CDK1 protein. WRW4 (an antagonist of Fpr2) could inhibit the proliferation of HepG2 cells in a concentration dependent manner, with an increase in the number of cells in the G0/G1 phase, and a decrease in the number of cells in the S phase. Serum alanine aminotransferase levels increased in Fpr2-/- mice. The Luminex assay measurements showed that interleukin (IL)-10 and chemokine (C-X-C motif) ligand (CXCL)-1 levels were significantly reduced in the liver of Fpr2-/- mice. There was no difference in the number of neutrophils, serum C-reactive protein levels, and liver pathology between WT and Fpr2-/- mice.
Conclusion:
Fpr2 participates in the regulation of cell cycle and cell proliferation, and affects the expression of IL-10 and CXCL-1, thus playing an important protective role in maintaining liver homeostasis.
Insights
Formyl peptide receptor 2 (Fpr2) plays a protective role in liver homeostasis by regulating cell cycle and proliferation. Loss of Fpr2 impacts IL-10 and CXCL-1 levels, affecting liver health during infections.
Area of Science:
- Immunology
- Molecular Biology
- Hepatology
Background:
- Formyl peptide receptor 2 (Fpr2) is crucial for host defense against bacterial infections.
- The liver is severely damaged in Fpr2-deficient mice during bloodstream infections, but the underlying mechanisms remain unclear.
Purpose of the Study:
- To elucidate the role of Fpr2 in maintaining liver homeostasis.
- To investigate Fpr2's function in host resistance against bacterial infections.
Main Methods:
- Transcriptome sequencing to identify differentially expressed genes (DEGs) in Fpr2-/- and wild-type (WT) mouse livers.
- Gene Ontology (GO) and KEGG pathway analyses for DEG functional enrichment.
- Validation of gene expression using qRT-PCR and Western blot; assessment of cell proliferation, cell cycle, cytokine levels, and liver pathology.
Main Results:
- 445 DEGs were identified in Fpr2-/- livers, primarily associated with cell cycle regulation.
- Key cell cycle genes (e.g., CycA, CycB1, Cdc20, Cdc25c, Cdk1) showed significant alterations, with decreased CDK1 protein expression.
- Fpr2 deficiency led to increased serum ALT, reduced IL-10 and CXCL-1 levels, and impaired HepG2 cell proliferation.
Conclusions:
- Fpr2 is integral to regulating the cell cycle and cell proliferation in the liver.
- Fpr2 influences the expression of IL-10 and CXCL-1, crucial for liver homeostasis.
- Fpr2 plays a significant protective role in maintaining liver health and function.
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