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Evaluation of Host-Pathogen Responses and Vaccine Efficacy in Mice
Published on: February 22, 2019
Large-deviations of disease spreading dynamics with vaccination
Yannick Feld1, Alexander K Hartmann1
1Institut für Physik, Carl von Ossietzky Universität Oldenburg, Oldenburg, Germany.
We simulated disease spread using a Susceptible-Infected-Recovered (SIR) model. Random and high-degree vaccination strategies were compared, revealing their impact on infection probability distributions.
Area of Science:
- Epidemiology
- Computational modeling
- Statistical physics
Background:
- Understanding disease dynamics is crucial for public health interventions.
- Contact network structure significantly influences epidemic spread.
- Vaccination strategies aim to mitigate disease transmission.
Purpose of the Study:
- To numerically simulate disease spread using a Susceptible-Infected-Recovered (SIR) model on small-world networks.
- To investigate the impact of random and high-degree vaccination strategies on the probability density function (pdf) of cumulative infections.
- To analyze the size-dependence of pdfs and typical/extreme infection courses using large-deviation theory.
Main Methods:
- Numerical simulation of SIR model on small-world contact networks.
- Application of a 1/t Wang-Landau algorithm for large-deviation analysis to obtain low-probability pdfs.
- Analysis of empirical rate functions to study size-dependence.
- Investigation of time series structures conditioned on cumulative infection values.
Main Results:
- The study quantifies the probability density function (pdf) of cumulative infections under different vaccination strategies.
- A large-deviation approach, specifically the 1/t Wang-Landau algorithm, was successfully applied to determine pdfs at extremely low probabilities (10^-80).
- Analysis of empirical rate functions revealed size-dependent behaviors within the large-deviation framework.
- Distinct time series structures were identified for typical, mild, and severe infection courses.
Conclusions:
- Both random and high-degree vaccination strategies significantly alter the probability distribution of cumulative infections.
- The 1/t Wang-Landau algorithm is effective for characterizing rare epidemic events.
- Understanding the relationship between network structure, vaccination strategy, and epidemic outcomes is essential for effective disease control.
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