Mixed strain pathogen populations accelerate the evolution of antibiotic resistance in patients

Julio Diaz Caballero1, Rachel M Wheatley1, Natalia Kapel1

  • 1University of Oxford, Department of Biology, 11a Mansfield Rd, Oxford, UK.

Nature Communications
|July 12, 2023
PubMed

Insights

Antibiotic resistance evolves faster in patients with mixed pathogen strains due to selection of pre-existing resistance. Within-host diversity also drives resistance loss when antibiotics are absent.

Area of Science:

  • Microbiology
  • Evolutionary Biology
  • Clinical Medicine

Background:

  • Antibiotic resistance is a major global health concern.
  • Understanding within-host pathogen evolution is crucial for effective treatment.
  • Pathogen populations are often assumed to be clonal within hosts.

Purpose of the Study:

  • To investigate the role of within-host pathogen diversity in the emergence of antibiotic resistance.
  • To compare resistance evolution in single-strain versus mixed-strain infections.
  • To explore the impact of within-host diversity on resistance dynamics.

Main Methods:

  • Studied the opportunistic pathogen Pseudomonas aeruginosa.
  • Analyzed pathogen populations within patients.
  • Compared resistance evolution in single-strain and mixed-strain colonization.

Main Results:

  • Mixed-strain populations of P. aeruginosa are common within hosts.
  • Rapid resistance evolution occurs in mixed-strain infections via selection of pre-existing resistant strains.
  • Sporadic resistance evolution in single-strain infections results from selection for novel mutations.
  • Strong trade-offs between resistance and growth rate in mixed strains can lead to resistance loss without antibiotics.

Conclusions:

  • Within-host pathogen diversity significantly influences the emergence and loss of antibiotic resistance.
  • Mixed-strain infections accelerate resistance evolution compared to single-strain infections.
  • Within-host diversity has a dual role, promoting resistance emergence under antibiotic pressure and loss in its absence.

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