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Updated: Jul 23, 2025

Genome-wide Protein-protein Interaction Screening by Protein-fragment Complementation Assay PCA in Living Cells
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Recent Advances in Deep Learning for Protein-Protein Interaction Analysis: A Comprehensive Review
1School of Electrical and Electronics Engineering, Chung-Ang University, Seoul 06974, Republic of Korea.
Deep learning is revolutionizing computational biology by accelerating the study of Protein-Protein Interactions (PPIs). This review analyzes recent advancements in deep learning for PPI analysis, aiding researchers in this dynamic field.
Area of Science:
- Computational Biology
- Artificial Intelligence
- Bioinformatics
Background:
- Protein-Protein Interactions (PPIs) are fundamental to biological processes.
- Understanding PPIs is crucial for deciphering biological systems and developing therapeutics.
- Deep learning (AI) is increasingly applied to analyze complex biological data.
Purpose of the Study:
- To provide a comprehensive review of deep learning methodologies applied to PPI analysis.
- To critically assess novel developments in the field from 2021-2023.
- To serve as a reference for researchers navigating deep learning in PPI analysis.
Main Methods:
- Literature review of studies published between 2021 and 2023.
- Analysis of cutting-edge deep learning techniques used in PPI analysis.
- Synthesis of recent advancements and trends.
Main Results:
- Identified a proliferation of deep learning applications in PPI analysis.
- Highlighted key deep learning methodologies currently employed.
- Showcased the rapid evolution of the field.
Conclusions:
- Deep learning is a transformative tool in computational biology for PPI analysis.
- This review consolidates recent progress, aiding researchers in understanding current trends.
- The findings offer insights into the synergistic relationship between AI and PPI research.
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