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Updated: Jul 23, 2025

In Vitro Analysis of E3 Ubiquitin Ligase Function
Published on: May 14, 2021
Structural basis for the ubiquitination of G protein βγ subunits by KCTD5/Cullin3 E3 ligase
Wentong Jiang1,2, Wei Wang2,3, Yinfei Kong4
1Graduate School of Peking Union Medical College, Beijing 100730, China.
Abstract:
G protein-coupled receptor (GPCR) signaling is precisely controlled to avoid overstimulation that results in detrimental consequences. Gβγ signaling is negatively regulated by a Cullin3 (Cul3)-dependent E3 ligase, KCTD5, which triggers ubiquitination and degradation of free Gβγ. Here, we report the cryo-electron microscopy structures of the KCTD5-Gβγ fusion complex and the KCTD7-Cul3 complex. KCTD5 in pentameric form engages symmetrically with five copies of Gβγ through its C-terminal domain. The unique pentameric assembly of the KCTD5/Cul3 E3 ligase places the ubiquitin-conjugating enzyme (E2) and the modification sites of Gβγ in close proximity and allows simultaneous transfer of ubiquitin from E2 to five Gβγ subunits. Moreover, we show that ubiquitination of Gβγ by KCTD5 is important for fine-tuning cyclic adenosine 3´,5´-monophosphate signaling of GPCRs. Our studies provide unprecedented insights into mechanisms of substrate recognition by unusual pentameric E3 ligases and highlight the KCTD family as emerging regulators of GPCR signaling.
Insights
A novel pentameric E3 ligase, KCTD5, regulates G protein-coupled receptor (GPCR) signaling by ubiquitylating Gβγ subunits. This mechanism fine-tunes cyclic adenosine monophosphate (cAMP) signaling, revealing KCTD proteins as key GPCR regulators.
Area of Science:
- Molecular Biology
- Structural Biology
- Cell Signaling
Background:
- G protein-coupled receptor (GPCR) signaling requires precise regulation to prevent detrimental overstimulation.
- Gβγ signaling, a component of GPCR pathways, is negatively controlled by the Cullin3 (Cul3)-dependent E3 ligase KCTD5.
- KCTD5 targets free Gβγ for ubiquitination and subsequent degradation.
Purpose of the Study:
- To elucidate the structural basis of KCTD5-mediated Gβγ regulation.
- To investigate the mechanism of substrate recognition and ubiquitination by the KCTD5/Cul3 E3 ligase complex.
- To understand the role of KCTD5 in fine-tuning GPCR signaling pathways.
Main Methods:
- Cryo-electron microscopy (cryo-EM) was used to determine the structures of the KCTD5-Gβγ fusion complex and the KCTD7-Cul3 complex.
- Structural analysis focused on the pentameric assembly of KCTD5 and its interaction with Gβγ subunits.
- Functional assays assessed the impact of KCTD5-mediated ubiquitination on Gβγ and cyclic adenosine 3´,5´-monophosphate (cAMP) signaling.
Main Results:
- The cryo-EM structures revealed a pentameric KCTD5 engaging symmetrically with five Gβγ subunits via its C-terminal domain.
- The unique pentameric E3 ligase assembly facilitates proximity between the ubiquitin-conjugating enzyme (E2) and Gβγ modification sites.
- Simultaneous ubiquitination of multiple Gβγ subunits by KCTD5 was observed, impacting GPCR-mediated cAMP signaling.
Conclusions:
- KCTD5 functions as a pentameric E3 ligase, uniquely recognizing and ubiquitylating multiple Gβγ subunits.
- This mechanism provides precise control over Gβγ signaling and fine-tunes GPCR-mediated cAMP responses.
- The KCTD family emerges as significant regulators of GPCR signaling, with KCTD5 offering insights into unusual E3 ligase assembly and substrate recognition.
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