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Updated: Jul 23, 2025

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
Long-term potassium-competitive acid blockers administration causes microbiota changes in rats
Haythem Najah1, Rodrigo C L Edelmuth2,3, Maria Cristina Riascos2
1Division of Endocrine & Minimally Invasive Surgery, Department of Surgery, New York-Presbyterian Hospital, Weill Cornell Medical College, 525 East 68th Street, K-836, New York, NY, 10065, USA. han4006@med.cornell.edu.
Vonoprazan, a novel acid blocker, alters gut microbiota composition in rats. This study reveals significant changes in bacterial diversity and abundance, highlighting the drug's impact on the gut microbiome.
Area of Science:
- Microbiology
- Pharmacology
- Gastroenterology
Background:
- Vonoprazan is a new potassium-competitive acid blocker (P-CAB) with rapid and long-lasting acid suppression.
- While vonoprazan-antibiotic regimens impact gut microbiota, the effect of vonoprazan alone remains unclear.
Purpose of the Study:
- To investigate the impact of vonoprazan monotherapy on gut microbiota composition in a rat model.
- To determine if short-term or long-term vonoprazan administration affects gut microbial diversity and abundance.
Main Methods:
- A 12-week prospective randomized trial involving 18 Wistar rats divided into three groups: control, 12-week vonoprazan, and 4-week vonoprazan followed by 8 weeks off.
- Metagenomic shotgun sequencing of fecal samples at baseline and week 12 to analyze gut microbiota composition.
Main Results:
- Vonoprazan administration (both short and long-term) resulted in lower Pielou's evenness index compared to controls.
- Significant differences in beta diversity were observed across all groups.
- Changes in relative bacterial abundance were noted at phylum, genus, and family levels, including decreases in Actinobacteria and Verrucomicrobia, and increases in Bacteroidales, Prevotella, and Lactobacillaceae.
Conclusions:
- Vonoprazan monotherapy significantly impacts gut microbiota composition and bacterial relative abundance.
- The study provides a detailed delineation of how vonoprazan affects the gut microbiome at various taxonomic levels.
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