Related Experiment Video
Updated: Jul 22, 2025

15:30
A Telemetric, Gravimetric Platform for Real-Time Physiological Phenotyping of Plant–Environment Interactions
Published on: August 5, 2020
11.6K
Upcycling rice yield trial data using a weather-driven crop growth model
Hiroyuki Shimono1,2, Akira Abe3, Chyon Hae Kim4
1Faculty of Agriculture, Iwate University, Morioka, Iwate, 020-8550, Japan. shimn@iwate-u.ac.jp.
Communications Biology
|July 21, 2023
Summary
This study introduces the YpCGM method to analyze rice yield data. This approach upcycles historical trial data to improve breeding strategies for climate-resilient crops.
Area of Science:
- Agricultural Science
- Plant Breeding
- Climate Change Adaptation
Background:
- Efficient plant breeding is crucial for food security amidst climate change.
- Multi-environment yield trials generate valuable data, but it's often underutilized.
- Existing methods struggle to effectively leverage accumulated cultivar performance data.
Purpose of the Study:
- To develop a novel method for quantifying cultivar-specific productivity using existing yield trial data.
- To enable the effective upcycling of historical yield data for advanced breeding applications.
- To guide the development of new rice cultivars adapted to changing climatic conditions.
Main Methods:
- Proposed the "YpCGM method" utilizing two regression coefficients: yield-ability (β) and yield-plasticity (α).
- Expressed individual cultivar yields as a linear regression against theoretical potential yield (Yp) from a crop growth model.
- Applied the method to a large dataset of 72,510 rice yield trials across 110 Japanese locations over 38 years.
Main Results:
- Successfully quantified cultivar-specific yield-ability and yield-plasticity.
- Demonstrated the YpCGM method's capability to upcycle extensive historical rice yield data.
- Validated the method's applicability across a diverse range of cultivars and environments.
Conclusions:
- The YpCGM method offers a powerful tool for analyzing historical yield data.
- This approach can significantly enhance genetic-gain analysis and genome-wide association studies.
- The method provides valuable insights for future plant breeding programs focused on climate adaptation.
More Related Videos
Related Concept Videos
Responses to Drought and Flooding
10.7K
Water plays a significant role in the life cycle of plants. However, insufficient or excess of water can be detrimental and pose a serious threat to plants.
10.7K
Light Acquisition
8.5K
In order to produce glucose, plants need to capture sufficient light energy. Many modern plants have evolved leaves specialized for light acquisition. Leaves can be only millimeters in width or tens of meters wide, depending on the environment. Due to competition for sunlight, evolution has driven the evolution of increasingly larger leaves and taller plants, to avoid shading by their neighbors with contaminant elaboration of root architecture and mechanisms to transport water and nutrients.
8.5K
Adaptations that Reduce Water Loss
25.8K
Though evaporation from plant leaves drives transpiration, it also results in loss of water. Because water is critical for photosynthetic reactions and other cellular processes, evolutionary pressures on plants in different environments have driven the acquisition of adaptations that reduce water loss.
25.8K
Multiple Regression
3.0K
Multiple regression assesses a linear relationship between one response or dependent variable and two or more independent variables. It has many practical applications.
Farmers can use multiple regression to determine the crop yield based on more than one factor, such as water availability, fertilizer, soil properties, etc. Here, the crop yield is the response or dependent variable as it depends on the other independent variables. The analysis requires the construction of a scatter plot...
Farmers can use multiple regression to determine the crop yield based on more than one factor, such as water availability, fertilizer, soil properties, etc. Here, the crop yield is the response or dependent variable as it depends on the other independent variables. The analysis requires the construction of a scatter plot...
3.0K
The Calvin Benson Cycle
4.6K
Ribulose 1,5- bisphosphate carboxylase/oxygenase (RuBisCo) is a critical enzyme that catalyzes carbon dioxide assimilation during photosynthesis. However, it is an inefficient enzyme, having an extremely slow catalytic rate. A typical enzyme can process about a thousand molecules per second; however, RuBisCo fixes only around three-carbon dioxides per second. Photosynthetic cells compensate for this slow rate by synthesizing very high amounts of RuBisCo, making it the most abundant single...
4.6K

