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Published on: December 9, 2015
Emerging Pharmacotherapeutic Strategies to Overcome Undruggable Proteins in Cancer
Yuqing Lu1, Yuewen Yang1, Guanghao Zhu2
1Dalian Medical University, 116044 Dalian City, Liaoning Province, China.
Abstract:
Targeted therapies in cancer treatment can improve in vivo efficacy and reduce adverse effects by altering the tissue exposure of specific biomolecules. However, there are still large number of target proteins in cancer are still undruggable, owing to the following factors including (1) lack of ligand-binding pockets, (2) function based on protein-protein interactions (PPIs), (3) the highly specific conserved active sites among protein family members, and (4) the variability of tertiary docking structures. The current status of undruggable targets proteins such as KRAS, TP53, C-MYC, PTP, are carefully introduced in this review. Some novel techniques and drug designing strategies have been applicated for overcoming these undruggable proteins, and the most classic and well-known technology is proteolysis targeting chimeras (PROTACs). In this review, the novel drug development strategies including targeting protein degradation, targeting PPI, targeting intrinsically disordered regions, as well as targeting protein-DNA binding are described, and we also discuss the potential of these strategies for overcoming the undruggable targets. Besides, intelligence-assisted technologies like Alpha-Fold help us a lot to predict the protein structure, which is beneficial for drug development. The discovery of new targets and the development of drugs targeting them, especially those undruggable targets, remain a huge challenge. New drug development strategies, better extraction processes that do not disrupt protein-protein interactions, and more precise artificial intelligence technologies may provide significant assistance in overcoming these undruggable targets.
Insights
Overcoming undruggable cancer targets requires novel strategies beyond traditional drug design. Emerging techniques like proteolysis targeting chimeras (PROTACs) and AI-driven structure prediction offer new hope for treating challenging cancers.
Area of Science:
- Oncology
- Drug Discovery
- Biochemistry
Background:
- Targeted cancer therapies aim to enhance efficacy and reduce side effects by modulating biomolecule exposure.
- Numerous cancer-related proteins remain undruggable due to factors like absent binding pockets, reliance on protein-protein interactions (PPIs), conserved active sites, and variable structures.
Purpose of the Study:
- To review the challenges posed by undruggable cancer targets (e.g., KRAS, TP53, C-MYC).
- To explore novel drug development strategies and technologies for overcoming these targets.
Main Methods:
- Discussion of current undruggable targets and their characteristics.
- Review of innovative strategies including proteolysis targeting chimeras (PROTACs), targeting protein degradation, PPIs, intrinsically disordered regions, and protein-DNA binding.
- Integration of intelligence-assisted technologies like Alpha-Fold for protein structure prediction.
Main Results:
- Identification of key challenges in targeting proteins like KRAS, TP53, C-MYC, and PTP.
- Presentation of various novel therapeutic strategies designed to address these undruggable targets.
- Highlighting the role of AI in predicting protein structures to aid drug development.
Conclusions:
- Developing drugs for undruggable targets remains a significant challenge in cancer therapy.
- Novel approaches such as PROTACs, targeting protein degradation, and AI-driven insights are crucial for future drug discovery.
- Advancements in drug development strategies and AI are essential for tackling previously undruggable cancer targets.
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