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Published on: August 15, 2019
Neuromuscular disease genetics in under-represented populations: increasing data diversity
Lindsay A Wilson1, William L Macken1, Luke D Perry2,3
1Department of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.
A global partnership improved genetic diagnosis for neuromuscular diseases (NMDs) in diverse populations, addressing data inequality. This initiative advanced understanding of NMD genetic architecture and facilitated DNA-based diagnostics for affected families worldwide.
Area of Science:
- Genomics and Bioinformatics
- Neurology and Genetic Medicine
- Global Health Equity
Background:
- Neuromuscular diseases (NMDs) impact millions globally, with diagnosis and treatment heavily reliant on DNA-based methods.
- Access to advanced genetic diagnostics and therapies is limited in low- and middle-income countries (LMICs).
- Existing genetic databases are predominantly European, creating significant data inequality and hindering diagnosis in diverse populations.
Purpose of the Study:
- To establish a transcontinental, cloud-based partnership to build diverse, deeply-phenotyped, and genetically characterized NMD cohorts.
- To improve the understanding of NMD genetic architecture across diverse ancestries.
- To advance genetic diagnosis and clinical management for NMD patients globally, particularly in under-represented regions.
Main Methods:
- Formation of a collaborative network connecting 18 centers across Brazil, India, South Africa, Turkey, Zambia, the Netherlands, and the UK.
- Development and implementation of a cloud-based data solution for cohort management and analysis.
- Training of international neurology fellows in clinical genomic data interpretation, followed by collaborative analysis of single gene and whole exome data via a bespoke bioinformatics pipeline.
Main Results:
- Recruitment of 6001 participants within 43 months, creating a large dataset from under-represented populations.
- Achieved a diagnostic yield of approximately 56% ('solved' or 'possibly solved') for probands overall, with higher rates for common NMD categories (∼59% solved, ∼13% possibly solved).
- Identified nearly 29% novel disease-causing variants, significantly expanding knowledge of pathogenic variants in diverse populations.
Conclusions:
- A remote, transcontinental partnership effectively assessed the genetic architecture of NMDs across diverse populations.
- The initiative successfully supported DNA-based diagnosis, enabling genetic counseling, improved care pathways, and eligibility for gene-specific trials.
- This model of virtual collaboration can be replicated in other global genomic neurological practices to reduce data inequality and benefit patients worldwide.
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