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Published on: August 28, 2019
Hepatotoxicity assessment investigations on PFASs targeting L-FABP using binding affinity data and machine
Jiayi Zhao1, Xiaoyue Shi2, Zhiqin Wang2
1Department of Medical Chemistry, School of Pharmacy, Qingdao University, Qingdao 266071, China; Department of Occupational and Environmental Health, School of Public Health, Qingdao University, Qingdao 266071, China.
Per- and polyfluoroalkyl substances (PFASs) can harm the liver by binding to liver fatty acid binding protein (L-FABP). This study developed a machine learning model to predict hazardous PFASs, identifying molecular flexibility as a key factor in their toxicity.
Area of Science:
- Environmental Chemistry
- Toxicology
- Computational Chemistry
Background:
- Per- and polyfluoroalkyl substances (PFASs) are persistent organic pollutants found globally.
- Assessing PFASs' safety, particularly their hepatotoxicity, is challenging.
- PFASs may accumulate in the liver and cause damage by interacting with liver fatty acid binding protein (L-FABP).
Purpose of the Study:
- To evaluate the binding affinity of various PFASs to L-FABP.
- To develop a predictive model for identifying potentially hazardous PFASs.
- To understand the molecular properties influencing PFASs-induced hepatotoxicity.
Main Methods:
- Computational analysis of two L-FABP binding sites.
- Development of a quantitative structure-activity relationship (QSAR) model using machine learning.
- Application of Bayesian Kernel Machine Regression (BKMR) to identify determinant molecular properties.
Main Results:
- L-FABP's inner site showed higher sensitivity to PFASs, with specific affinities for different PFAS chemical classes.
- A QSAR model was successfully developed for predicting PFAS hepatotoxicity.
- Molecular flexibility was identified as a critical factor in PFAS-induced hepatotoxicity, affecting binding affinity through individual and joint effects.
Conclusions:
- Understanding PFAS binding to L-FABP is crucial for assessing hepatotoxicity.
- The developed QSAR model offers an efficient method for predicting hazardous PFASs.
- Identifying molecular flexibility as a key determinant provides insights for risk assessment and developing safer alternatives.
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