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On-chip label-free cell classification based directly on off-axis holograms and spatial-frequency-invariant deep
Matan Dudaie1, Itay Barnea1, Noga Nissim1
1Department of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, 69978, Tel Aviv, Israel.
Scientific Reports
|July 31, 2023
Summary
We developed a fast, label-free method for classifying cells using raw digital holograms. This new approach speeds up imaging flow cytometry by analyzing holographic images directly, bypassing lengthy reconstruction steps.
Area of Science:
- Biophotonics
- Computational Biology
- Cellular Imaging
Background:
- Imaging flow cytometry is crucial for cell analysis.
- Current methods often require time-consuming cell profile reconstruction for classification.
- Label-free techniques are desirable for preserving cell viability and simplifying workflows.
Purpose of the Study:
- To develop a rapid, label-free cell classification method using raw digital holograms.
- To bypass the computationally intensive phase profile reconstruction step in holographic imaging flow cytometry.
- To enhance the speed and robustness of cell classification in high-throughput screening.
Main Methods:
- Acquisition of raw off-axis digital holograms of cells in flow.
- Development of a convolutional neural network (CNN) trained on raw holographic images.
- CNN designed to be invariant to spatial frequencies and fringe directions in holograms.
- Validation using four distinct cancer cell types.
Main Results:
- Demonstrated successful label-free classification of individual cells directly from raw holograms.
- Achieved classification without the need for quantitative phase profile reconstruction.
- Showcased the CNN's ability to handle variations in holographic fringe patterns.
- Validated the approach on multiple cancer cell lines.
Conclusions:
- The presented method significantly accelerates label-free cell classification in imaging flow cytometry.
- Direct analysis of raw digital holograms offers a faster and potentially more robust alternative to traditional reconstruction-based methods.
- This approach holds promise for real-time, high-throughput cellular analysis in various biological and clinical applications.
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