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High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing
Published on: May 21, 2020
Total transcriptome analysis of Candida auris planktonic cells exposed to tyrosol
Noémi Balla1,2, Ágnes Jakab1,3, Fruzsina Kovács1,2
1Department of Medical Microbiology, Faculty of Medicine, University of Debrecen, Nagyerdei krt. 98, Debrecen, 4032, Hungary.
Abstract:
Tyrosol, a secondary metabolite of Candida species, regulates fungal morphogenesis, and its application may represent a novel innovative therapy against emerging multi-resistant fungal superbug such as Candida auris. In the current study, the effects of tyrosol on growth, redox homeostasis, intracellular microelement contents and activities of virulence-related enzymes released by C. auris were examined. To gain further information about the effect of tyrosol exposure, we revealed gene transcriptional changes using total transcriptome sequencing (RNA-Seq). At a concentration of 15 mM, tyrosol significantly decrease the growth of fungal cells within 2 h of its addition (5.6 × 107±1.2 × 107 and 2.5 × 107±0.6 × 107 colony forming unit/mL for control and tyrosol-treated cells, respectively). Furthermore, it enhanced the release of reactive oxygen species as confirmed by a dichlorofluorescein (DCF) assay (7.3 ± 1.8 [nmol DCF (OD640)-1] versus 16.8 ± 3.9 [nmol DCF (OD640)-1]), which was coincided with elevated superoxide dismutase, catalase and glutathione peroxidase activities. Tyrosol exerted in a 37%, 25%, 34% and 55% decrease in intracellular manganese, iron, zinc and copper contents, respectively, compared to control cells. The tyrosol treatment led to a 142 and 108 differentially transcripted genes with at least a 1.5-fold increase or decrease in transcription, respectively. Genes related to iron and fatty acid metabolism as well as nucleic acid synthesis were down-regulated, whereas those related to the antioxidative defence, adhesion and oxoacid metabolic processes were up-regulated. This study shows that tyrosol significantly influences growth, intracellular physiological processes and gene transcription in C. auris, which could highly support the development of novel treatment approaches against this important pathogen.
Insights
Tyrosol, a compound from Candida species, significantly inhibits Candida auris growth and alters its gene expression. This research highlights tyrosol
Area of Science:
- Mycology
- Antimicrobial Research
- Molecular Biology
Background:
- Candida auris is a multi-drug resistant fungal pathogen causing severe infections.
- Tyrosol, a fungal metabolite, regulates morphogenesis and shows potential therapeutic applications.
- Understanding tyrosol's impact on C. auris is crucial for developing new antifungal strategies.
Purpose of the Study:
- To investigate the effects of tyrosol on the growth, redox balance, and virulence factors of Candida auris.
- To analyze gene transcriptional changes induced by tyrosol exposure in C. auris using RNA-Seq.
- To assess the potential of tyrosol as a novel therapeutic agent against C. auris.
Main Methods:
- Culturing C. auris and treating with tyrosol (15 mM).
- Measuring fungal growth (CFU/mL) and reactive oxygen species (ROS) production (DCF assay).
- Assessing intracellular microelement content and enzyme activities; performing whole-transcriptome sequencing (RNA-Seq).
Main Results:
- Tyrosol (15 mM) significantly reduced C. auris growth and increased ROS production within 2 hours.
- Elevated activities of superoxide dismutase, catalase, and glutathione peroxidase were observed.
- Tyrosol decreased intracellular manganese, iron, zinc, and copper levels and altered gene expression, upregulating antioxidative and adhesion genes while downregulating iron metabolism genes.
Conclusions:
- Tyrosol significantly impacts C. auris growth, redox homeostasis, and intracellular physiology.
- Tyrosol modulates gene transcription, affecting key metabolic and virulence pathways in C. auris.
- Tyrosol demonstrates potential as a novel therapeutic lead against multidrug-resistant Candida auris infections.
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