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Updated: Jul 20, 2025

Screening for Endocrine Activity in Water Using Commercially-available In Vitro Transactivation Bioassays
Published on: December 4, 2016
Combining predictive and analytical methods to elucidate pharmaceutical biotransformation in activated sludge.
Leo Trostel1, Claudia Coll1, Kathrin Fenner1,2
1Department of Environmental Chemistry, Swiss Federal Institute of Aquatic Science and Technology (Eawag), Dübendorf, 8600, Zürich, Switzerland. kathrin.fenner@eawag.ch.
Scientists developed an automated workflow to identify pharmaceutical transformation products (TPs) from biodegradation. This method successfully identified 79 TPs for 31 drugs, improving environmental monitoring and chemical risk assessment.
Area of Science:
- Environmental Chemistry
- Microbiology
- Ecotoxicology
Background:
- Man-made chemicals, including pharmaceuticals, are widespread environmental contaminants.
- Their environmental fate and the ecological impact of biodegradation transformation products (TPs) are often poorly understood.
- Microbial communities drive biodegradation, converting pharmaceuticals into TPs that may pose ecological risks.
Purpose of the Study:
- To review existing TP identification workflows.
- To apply an updated, automated workflow for predicting and identifying TPs from pharmaceutical biodegradation in activated sludge.
- To benchmark different pathway prediction models for their utility in environmental analysis.
Main Methods:
- Review of past TP identification workflow applications.
- Application of an updated workflow to predict TPs for 42 pharmaceuticals undergoing biodegradation in activated sludge.
- Benchmarking of five pathway prediction models, including enviPath and EAWAG systems.
- Automation of previously manual steps in TP identification.
Main Results:
- Tentative identification of 79 TPs for 31 pharmaceutical compounds using the updated workflow.
- Demonstration of the enviPath prediction system's utility for generating suspect lists for screening.
- Successful automation of several manual steps in the TP identification process.
- Proposal of new strategies to enhance the accuracy of pathway prediction models.
Conclusions:
- The developed workflow effectively identifies pharmaceutical TPs in activated sludge.
- The study provides a valuable tool for environmental monitoring and risk assessment of pharmaceutical pollution.
- Benchmarking results offer insights for improving predictive models and their application in environmental studies.
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