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Related Experiment Video

Updated: Jul 19, 2025

Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo

Neurovascular Network Explorer 2.0: A Simple Tool for Exploring and Sharing a Database of Optogenetically-evoked Vasomotion in Mouse Cortex In Vivo

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ScopeViewer: A Browser-Based Solution for Visualizing Spatial Transcriptomics Data.

Danni Luo¹, Sophie Robertson², Yuanchun Zhan¹

¹Quantitative Biomedical Research Center, Peter O'Donnell Jr. School of Public Health, UT Southwestern Medical Center.

Biorxiv : the Preprint Server for Biology

|August 7, 2023

Summary

This summary is machine-generated.

ScopeViewer is a new browser-based software that simplifies visualizing complex spatial transcriptomics data. It allows interactive exploration of molecular and image data, enhancing research accessibility.

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Area of Science:

Genomics
Bioinformatics
Computational Biology

Background:

Spatial transcriptomics (ST) offers high-resolution molecular profiling within tissue context.
Visualizing large ST datasets with integrated molecular and image information presents significant challenges.

Conclusions:

ScopeViewer effectively addresses the challenges of ST data visualization.
The software enhances accessibility and usability for spatial transcriptomics research.
ScopeViewer promotes seamless integration of molecular and spatial information for biological discovery.