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PyBEAM: A Bayesian approach to parameter inference for a wide class of binary evidence accumulation models
Matthew Murrow1, William R Holmes2
1Department of Physics and Astronomy, Vanderbilt University, 6301 Stevenson Science Center, Nashville, 37212, TN, USA.
PyBEAM is a new Python package for Bayesian Evidence Accumulation Models (EAMs). It expands complex EAMs, reduces computation time, and makes them more accessible for decision-making research.
Area of Science:
- Cognitive Science
- Computational Neuroscience
- Psychology
Background:
- Decision-making theories often use evidence accumulation models (EAMs).
- The Diffusion Decision Model (DDM) is a popular EAM but has limitations.
- Complex EAMs are computationally challenging, limiting their application.
Purpose of the Study:
- Introduce PyBEAM, a Python package for Bayesian Evidence Accumulation Models.
- Develop a general probabilistic framework for binary decision models.
- Address computational challenges in applying Bayesian methods to complex EAMs.
Main Methods:
- Developed a general probabilistic framework for choice and response time distributions in binary decision models.
- Integrated computationally optimized modeling with PyMC for Bayesian parameter estimation.
- Demonstrated parameter recovery for various EAMs.
Main Results:
- PyBEAM expands the range of EAMs applicable to Bayesian analysis.
- The package significantly reduces computational time for EAM analysis.
- PyBEAM lowers the barrier to entry for researchers using complex EAMs.
Conclusions:
- PyBEAM offers a powerful and accessible tool for advancing decision-making research.
- The package facilitates the application of complex EAMs to real-world data.
- This work enhances the computational and practical aspects of EAM analysis.
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