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Manipulative-based Activity Using Pop Beads for Demonstration of Sanger Sequencing.
Kylie Light1, Jordan Brooks1, Yun-Seok Choi1
1School of Natural Sciences, Black Hills State University, Spearfish, South Dakota 57799, United States.
Journal of Chemical Education
|August 14, 2023
Summary
A new hands-on activity uses pop beads to teach Sanger sequencing, a DNA sequencing method. This kinesthetic approach visually demonstrates chain termination and fragment separation for better student understanding.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics Education
Background:
- Sanger sequencing (dideoxy sequencing) is a fundamental DNA sequencing technique.
- It relies on chain-termination reactions, gel electrophoresis, and fluorescence detection.
- Current educational methods lack practical Sanger sequencing activities for skill development.
Purpose of the Study:
- To develop a manipulative-based activity to teach Sanger sequencing.
- To provide a kinesthetic and visual learning tool for students.
- To illustrate chain termination, product separation, and fluorescence detection in DNA sequencing.
Main Methods:
- Developed a Sanger sequencing activity using colorful pop beads.
- Pop beads represent deoxynucleotides and dideoxynucleotides.
- Activity simulates DNA fragment generation via chain termination.
Main Results:
- The pop bead activity visually demonstrates DNA fragment generation.
- It effectively models chain termination and product separation.
- The kinesthetic approach enhances student comprehension of Sanger sequencing principles.
Conclusions:
- The manipulative-based activity provides a high-impact visual learning experience.
- It successfully replicates key steps of the Sanger sequencing process.
- This method can also be adapted to teach polymerase chain reaction (PCR)-based techniques.
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