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Updated: Jul 19, 2025

Study of Protein-protein Interactions in Autophagy Research
Published on: September 9, 2017
TRPML3/BK complex promotes autophagy and bacterial clearance by providing a positive feedback regulation of mTOR via
Mengnan Xu1, Xi Zoë Zhong1, Peng Huang1,2
1Department of Physiology and Biophysics, Dalhousie University, Halifax, NS B3H 4R2, Canada.
Abstract:
TRPML3 is a Ca2+/Na+ release channel residing in both phagophores and endolysosomal membranes. It is activated by PI3P and PI3,5P2. Its activity can be enhanced by high luminal pH and by replacing luminal Na+ with K+. Here, we report that big-conductance Ca2+-activated potassium (BK) channels form a positive feedback loop with TRPML3. Ca2+ release via TRPML3 activates BK, which in turn facilitates TRPML3-mediated Ca2+ release, potentially through removing luminal Na+ inhibition. We further show that TRPML3/BK and mammalian target of rapamycin (mTOR) form another positive feedback loop to facilitate autophagy induction in response to nutrient starvation, i.e., mTOR inhibition upon nutrient starvation activates TRPML3/BK, and this further reduces mTOR activity, thereby increasing autophagy induction. Mechanistically, the feedback regulation between TRPML3/BK and mTOR is mediated by PI3P, an endogenous TRPML3 activator that is enriched in phagophores and is up-regulated by mTOR reduction. Importantly, bacterial infection activates TRPML3 in a BK-dependent manner, and both TRPML3 and BK are required for mTOR suppression and autophagy induction responding to bacterial infection. Suppressing either TRPML3 or BK helps bacteria survival whereas increasing either TRPML3 or BK favors bacterial clearance. Considering that TRPML3/BK is inhibited by low luminal pH but activated by high luminal pH and PI3P in phagophores, we suggest that TRPML3/BK and mTOR form a positive feedback loop via PI3P to ensure efficient autophagy induction in response to nutrient deprivation and bacterial infection. Our study reveals a role of TRPML3-BK coupling in controlling cellular homeostasis and intracellular bacterial clearance via regulating mTOR signaling.
Insights
The TRPML3 channel and BK channels form a feedback loop that enhances calcium release and autophagy. This TRPML3-BK pathway is crucial for clearing bacterial infections by suppressing mTOR signaling.
Area of Science:
- Cellular Biology
- Ion Channels
- Autophagy Regulation
Background:
- TRPML3 is a calcium/sodium release channel involved in cellular processes.
- Big-conductance calcium-activated potassium (BK) channels are critical for cellular excitability.
- Autophagy is a key cellular process for maintaining homeostasis and responding to stress.
Purpose of the Study:
- To investigate the functional relationship between TRPML3 and BK channels.
- To elucidate the role of the TRPML3-BK interaction in autophagy induction.
- To determine the involvement of TRPML3-BK signaling in response to nutrient starvation and bacterial infection.
Main Methods:
- Electrophysiological recordings to study channel activity.
- Calcium imaging to assess ion flux.
- Western blotting to analyze protein levels and signaling pathways (e.g., mTOR).
- Cell-based assays to monitor autophagy and bacterial clearance.
Main Results:
- TRPML3 and BK channels form a positive feedback loop, where TRPML3-activated calcium release enhances BK channel activity, which in turn promotes further TRPML3-mediated calcium release.
- The TRPML3-BK complex and mTOR signaling are interconnected through a positive feedback loop that facilitates autophagy induction.
- This TRPML3-BK-mTOR pathway is activated during nutrient starvation and bacterial infection, promoting autophagy and bacterial clearance.
- TRPML3 and BK channels are essential for suppressing mTOR activity and inducing autophagy in response to bacterial infection, with their modulation impacting bacterial survival.
Conclusions:
- TRPML3 and BK channels form a novel functional unit that regulates cellular calcium homeostasis and autophagy.
- The TRPML3-BK pathway plays a critical role in cellular defense mechanisms against bacterial infection by modulating mTOR signaling and promoting autophagy.
- Targeting the TRPML3-BK interaction offers a potential strategy for enhancing bacterial clearance and managing infectious diseases.
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