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Updated: Jul 19, 2025

Strand-Specific Analysis of Proteins at Replicating DNA Strands by Enrichment and Sequencing of Protein-Associated Nascent DNA Method
Published on: May 2, 2025
In silico protein interaction screening uncovers DONSON's role in replication initiation
Yang Lim1, Lukas Tamayo-Orrego2, Ernst Schmid1
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Blavatnik Institute, Boston, MA 02115, USA.
DONSON protein is crucial for eukaryotic DNA replication initiation by assembling the CDC45-MCM2-7-GINS (CMG) helicase. Mutations in DONSON cause microcephalic dwarfism, highlighting its role in human development.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Eukaryotic DNA replication initiation relies on the assembly of the CDC45-MCM2-7-GINS (CMG) helicase.
- In yeast, a pre-loading complex (pre-LC) facilitates GINS binding to chromatin-associated MCM2-7 to form CMG.
- The precise mechanism of CMG assembly in vertebrates remains incompletely understood.
Purpose of the Study:
- To investigate the role of the metazoan protein DONSON in CMG helicase assembly in vertebrates.
- To elucidate the function of DONSON in the context of replication initiation and its potential link to microcephalic primordial dwarfism.
Main Methods:
- Utilized AlphaFold for in silico screening of protein-protein interactions.
- Performed experimental validation of predicted protein interactions.
- Investigated the impact of a patient-derived DONSON mutation on CMG assembly and its phenotypic consequences in a mouse model.
Main Results:
- DONSON acts as a scaffold for a vertebrate pre-LC, including GINS, TOPBP1, and DNA polymerase epsilon.
- DONSON facilitates the docking of the pre-LC onto MCM2-7, thereby delivering GINS for CMG formation.
- A patient-derived DONSON mutation impairs CMG assembly and causes microcephalic dwarfism in mice.
Conclusions:
- DONSON is essential for CMG helicase assembly in vertebrates, unifying understanding of eukaryotic replication initiation.
- Defective CMG assembly due to DONSON mutations is implicated in microcephalic dwarfism.
- In silico protein-protein interaction screening, exemplified by AlphaFold, accelerates mechanistic biological discovery.
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