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Exposure notification system activity as a leading indicator for SARS-COV-2 caseload forecasting.
Eliah Aronoff-Spencer1, Sepideh Mazrouee1, Rishi Graham1
1School of Medicine, Division of Infectious Diseases and Global Public Health, University of California San Diego, La Jolla, CA, United States of America.
Plos One
|August 18, 2023
Summary
Digital Exposure Notification (EN) systems can improve COVID-19 case forecasting. Integrating EN data into models significantly enhanced prediction accuracy, offering potential for early warning systems.
Area of Science:
- Epidemiology
- Public Health Informatics
- Computational Biology
Background:
- COVID-19 pandemic spurred development of digital Exposure Notification (EN) systems.
- These systems offer novel avenues for public health interventions.
- Limited research exists on utilizing real-time EN data for predictive epidemiological modeling.
Purpose of the Study:
- To assess the utility of real-time data from California's CA Notify (Google Apple Exposure Notification - GAEN platform) for short-term COVID-19 case forecasting.
- To determine if incorporating EN activity improves predictive accuracy compared to traditional models.
Main Methods:
- Extended a statistical model using historical case counts to predict future caseloads.
- Integrated anonymized EN activity data from CA Notify into the forecasting model.
- Compared model performance (with and without EN data) against actual reported caseloads for 1-7 day forecasts.
Main Results:
- Time series analysis revealed a temporal association between EN system activity and COVID-19 caseloads.
- Incorporating EN data significantly improved short-term caseload prediction accuracy.
- Bayesian inference confirmed a non-zero influence of EN terms, reducing Mean Absolute Percentage Error and Mean Squared Prediction Error by 5-32%.
Conclusions:
- Smartphone-based EN systems demonstrably enhance the accuracy of short-term epidemiological forecasts.
- These predictive models show promise for deployment as local early warning systems for resource allocation and intervention planning.
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