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Explainable Supervised Machine Learning Model To Predict Solvation Gibbs Energy.

José Ferraz-Caetano1, Filipe Teixeira2, M Natália D S Cordeiro1

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We developed a novel machine learning model for predicting solvation free energy (ΔGsol) with high accuracy and speed. This model provides valuable chemical insights, outperforming existing methods without complex simulations.

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Area of Science:

  • Computational Chemistry
  • Machine Learning Applications

Background:

  • Accurate prediction of solvation free energy (ΔGsol) remains a challenge for computational models.
  • Existing machine learning (ML) methods offer speed but lack explanatory power for broad chemical predictions.

Purpose of the Study:

  • To develop a novel supervised ML model for predicting ΔGsol.
  • To achieve a favorable speed-accuracy trade-off with enhanced explanatory insights.

Main Methods:

  • Utilized two ensemble regressor algorithms for ML model development.
  • Employed open-source chemical features encoding electronic, structural, and surface area descriptors.
  • Integrated molecular properties and chemical interaction features for analysis.

Main Results:

  • Achieved high accuracy in ΔGsol prediction, outperforming benchmark Neural Network methods.
  • Identified increasing polar surface area and decreasing polarizability as key solute descriptors.
  • Demonstrated a maximum absolute error of 0.22 ± 0.02 kcal mol⁻¹.
  • Validated model performance on external databases and through solvent hold-out tests.

Conclusions:

  • The developed ML model offers a fast and accurate approach for predicting ΔGsol.
  • The model provides valuable explanatory insights into descriptor importance.
  • This method holds potential for predicting other thermodynamic properties in computational chemistry.