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A Phenotyping Regimen for Genetically Modified Mice Used to Study Genes Implicated in Human Diseases of Aging
Published on: July 14, 2016
Environmental and genetic predictors of human cardiovascular ageing
Mit Shah1, Marco H de A Inácio1, Chang Lu1
1MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Insights
Cardiovascular ageing, a complex process, is influenced by genetic variants affecting heart function and repair. Machine learning identified key genes and risk factors accelerating heart ageing, offering targets to slow this process.
Area of Science:
- Cardiovascular Biology
- Genetics
- Computational Biology
Background:
- Cardiovascular ageing involves progressive structural changes and functional decline due to accumulated cellular damage.
- Factors like biophysical, metabolic, and immunological stress overwhelm repair mechanisms, leading to fibrosis and senescence.
- The genetic underpinnings of cardiovascular ageing remain largely unknown.
Purpose of the Study:
- To investigate the genetic architecture of cardiovascular ageing.
- To quantify cardiovascular age using machine learning and diverse physiological traits.
- To identify genetic variants and factors influencing accelerated cardiovascular ageing.
Main Methods:
- Utilized machine learning to quantify cardiovascular age from UK Biobank data (39,559 participants).
- Integrated image-derived traits (vascular function, cardiac motion, fibrosis) and electrocardiogram data.
- Performed genome-wide association studies to identify genetic variants associated with cardiovascular age.
Main Results:
- Identified significant associations between cardiovascular ageing and genetic variants in genes regulating sarcomere homeostasis, immune response, and stress response.
- Cardiovascular ageing is accelerated by cardiometabolic risk factors.
- Discovered potential modifying effects of prescribed medications on cardiovascular ageing.
Conclusions:
- Revealed insights into mechanisms driving premature cardiovascular ageing through large-scale multi-trait modeling.
- Highlighted the role of specific genetic pathways in cardiovascular ageing.
- Identified potential molecular targets for attenuating age-related cardiovascular decline.
Abstract:
Cardiovascular ageing is a process that begins early in life and leads to a progressive change in structure and decline in function due to accumulated damage across diverse cell types, tissues and organs contributing to multi-morbidity. Damaging biophysical, metabolic and immunological factors exceed endogenous repair mechanisms resulting in a pro-fibrotic state, cellular senescence and end-organ damage, however the genetic architecture of cardiovascular ageing is not known. Here we use machine learning approaches to quantify cardiovascular age from image-derived traits of vascular function, cardiac motion and myocardial fibrosis, as well as conduction traits from electrocardiograms, in 39,559 participants of UK Biobank. Cardiovascular ageing is found to be significantly associated with common or rare variants in genes regulating sarcomere homeostasis, myocardial immunomodulation, and tissue responses to biophysical stress. Ageing is accelerated by cardiometabolic risk factors and we also identify prescribed medications that are potential modifiers of ageing. Through large-scale modelling of ageing across multiple traits our results reveal insights into the mechanisms driving premature cardiovascular ageing and reveal potential molecular targets to attenuate age-related processes.
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