Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration01:16

IR Spectroscopy: Hooke's Law Approximation of Molecular Vibration

1.4K
A covalently bonded heteronuclear diatomic molecule can be modeled as two vibrating masses connected by a spring. The vibrational frequency of the bond can be expressed using an equation derived from Hooke's law, which describes how the force applied to stretch or compress a spring is proportional to the displacement of the spring. In this case, the atoms behave like masses, and the bond acts like a spring.
According to Hooke's law, the vibrational frequency is directly proportional to...
1.4K
UV–Vis Spectroscopy: Molecular Electronic Transitions01:16

UV–Vis Spectroscopy: Molecular Electronic Transitions

1.6K
In Ultraviolet–Visible (UV–Vis) spectroscopy, the absorption of electromagnetic radiation is used to probe the electronic structure of molecules. This technique provides insights into molecular electronic transitions, particularly the movement of electrons between different molecular orbitals. Radiation is absorbed if the energy of the electromagnetic radiation passing through the molecule is precisely equal to the energy difference between the excited and ground states. During this...
1.6K
IR Spectroscopy: Molecular Vibration Overview01:24

IR Spectroscopy: Molecular Vibration Overview

2.4K
When Infrared (IR) radiation passes through a covalently bonded molecule, the bonds transition from lower to higher vibrational levels. The fundamental vibrational motions that result in infrared absorption can be classified as stretching or bending vibrations.
Stretching vibrations are vibrational motions that occur along the bond line, changing the bond length or distance between two bonded atoms. They are further distinguished as symmetric or asymmetric. In symmetric stretching, the...
2.4K
UV–Vis Spectroscopy of Conjugated Systems01:32

UV–Vis Spectroscopy of Conjugated Systems

7.1K
Organic compounds with conjugated double bonds show strong absorption features in the UV–visible region of the electromagnetic spectrum attributed to π → π* electronic excitations. Generally, a UV–vis absorption spectrum is recorded as a plot of absorbance vs wavelength. The wavelength of maximum absorbance, which manifests as a peak in the absorption spectrum, is denoted as λmax.
One of the factors influencing λmax is the extent...
7.1K
UV–Vis Spectroscopy: Woodward–Fieser Rules01:29

UV–Vis Spectroscopy: Woodward–Fieser Rules

24.6K
UV–Visible absorption spectra of conjugated dienes arise from the lowest energy π → π* transitions. The light-absorbing part of the molecule is called the chromophore, and the substituents directly attached to the chromophore are called auxochromes. A strong correlation exists between the absorption maxima, λmax, and the structure of a conjugated π system. The Woodward–Fieser rules predict the value of λmax for a given...
24.6K
IR Spectrum Peak Broadening: Hydrogen Bonding01:23

IR Spectrum Peak Broadening: Hydrogen Bonding

1.1K
The vibrational frequency of a bond is directly proportional to its bond strength. As a result, stronger bonds vibrate at higher frequencies, while weaker bonds vibrate at lower frequencies. The stretching vibration of the strong O–H bond in alcohols and phenols (very dilute solution or gas phase) appears as a sharp peak at 3600–3650 cm−1.
However, the extent of hydrogen bonding influences the observed stretching frequency and band broadening. Intermolecular or intramolecular...
1.1K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A Theoretical Study of Electron Attachment to Uracil and 5-Halouracil.

Chemphyschem : a European journal of chemical physics and physical chemistry·2026
Same author

Toward Quantitative Reaction Dynamics of O<sub>3</sub>.

The journal of physical chemistry letters·2026
Same author

HyDRA-II: spectroscopic results and BEsT guesses for the mono- and dihydrate blind challenge.

Physical chemistry chemical physics : PCCP·2026
Same author

Improved ab initio molecular dynamics-based vibrational spectroscopy for indirect hard modeling for bulk-phase vibrational spectroscopy using vibrational scaling and sampling diagnostics.

The Journal of chemical physics·2026
Same author

Computational Study of Arsenite Binding to Tetraglycine: Structural and Energetic Insights.

Chemistry, an Asian journal·2026
Same author

Reaction Pathway Dynamics for Atmospheric Decomposition Reactions: Unimolecular Dissociation of H<sub>2</sub>COO.

The journal of physical chemistry letters·2026

Related Experiment Video

Updated: Jul 18, 2025

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid
08:54

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid

Published on: January 25, 2020

5.7K

The first HyDRA challenge for computational vibrational spectroscopy.

Taija L Fischer1, Margarethe Bödecker1, Sophie M Schweer1

  • 1Institut für Physikalische Chemie, Universität Göttingen, Tammannstraße 6, Göttingen, Germany. rmata@gwdg.de.

Physical Chemistry Chemical Physics : PCCP
|August 23, 2023
PubMed
Summary
This summary is machine-generated.

Vibrational spectroscopy in supersonic jet expansions provides ideal conditions for benchmarking quantum chemistry models. The first HyDRA challenge tested predictions of water vibrations in organic monohydrates, showing promising results for computational methods.

More Related Videos

Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures
08:49

Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures

Published on: December 1, 2023

1.4K
Determination of the Photoisomerization Quantum Yield of a Hydrazone Photoswitch
09:33

Determination of the Photoisomerization Quantum Yield of a Hydrazone Photoswitch

Published on: February 7, 2022

3.4K

Related Experiment Videos

Last Updated: Jul 18, 2025

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid
08:54

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid

Published on: January 25, 2020

5.7K
Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures
08:49

Author Spotlight: Unveiling the Potential of VSFG Microscopy in Studying Mesoscopically Heterogeneous Self-Assembled Structures

Published on: December 1, 2023

1.4K
Determination of the Photoisomerization Quantum Yield of a Hydrazone Photoswitch
09:33

Determination of the Photoisomerization Quantum Yield of a Hydrazone Photoswitch

Published on: February 7, 2022

3.4K

Area of Science:

  • Physical Chemistry
  • Computational Chemistry
  • Spectroscopy

Background:

  • Vibrational spectroscopy in supersonic jet expansions offers near-ideal conditions for molecular aggregate analysis.
  • This technique facilitates direct comparison between experimental and computed spectra due to low temperatures and minimal environmental effects.
  • It serves as a valuable tool for benchmarking quantum chemical approaches and refining computational methods.

Purpose of the Study:

  • To present spectroscopic and computational results from the first HyDRA blind challenge.
  • To evaluate the predictive accuracy of computational models for water donor stretching vibrations in organic monohydrates.
  • To provide a benchmark dataset for assessing quantum chemical and machine learning strategies.

Main Methods:

  • Utilizing supersonic jet expansions for vibrational spectroscopy of vacuum-isolated monohydrates.
  • Conducting a blind challenge where computational models predict experimental vibrational wavenumbers.
  • Testing a set of 10 diverse organic monohydrate systems.

Main Results:

  • Experimental vibrational wavenumbers (OH stretching) were obtained for 10 organic monohydrates.
  • The challenge assessed the performance of various quantum mechanical, regression, and machine learning approaches.
  • Results indicate promising predictive capabilities across different computational strategies.

Conclusions:

  • Supersonic jet expansion vibrational spectroscopy is a robust method for generating benchmarking data.
  • Computational methods, including quantum mechanics and machine learning, show potential for accurately predicting vibrational spectra.
  • The HyDRA challenge successfully provided an unbiased assessment of computational models for molecular systems.