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Updated: Jul 18, 2025

Isolation and Genome Analysis of Single Virions using 'Single Virus Genomics'
Published on: May 26, 2013
Isolation and genome sequencing of a novel lytic Pseudoalteromonas phage SL20
Huifang Li1, Jie Gao2, Shiyun Ma2
1Jiangsu Institute of Marine Resources Development, Jiangsu Ocean University, Lianyungang 222005, PR China; College of Marine Life Sciences, Ocean University of China, Qingdao, PR China; MNR Key Laboratory of Coastal Salt Marsh Ecosystems and Resources, Jiangsu Ocean University, Lianyungang 222005, PR China.
Abstract:
Phage SL20, a novel lytic Pseudoalteromonas phage, was isolated from the coastal waters of the Yellow Sea, China. The microbiological characterization demonstrated that phage SL20 was relatively stable from 35 to 55 °C and the optimal pH was approximately 6.0. A latent period of approximately 24 min was indicated by a one-step growth curve. The burst size was approximately 12 ± 3 PFU/cell. The genome had a length of 120,295 bp with a G + C content of 35.84%, and predicted 95 ORFs. The phylogenetic tree based on DNA helicase showed that Pseudoalteromonas phage SL20 was related to the Pseudoalteromonas phage H101 and was a member of the family Shandongvirus. The isolation and genomic analysis of SL20 has improved our understanding of host-phage interactions and the ecology of the marine bacteria Pseudoalteromonas.
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