Related Experiment Video
Updated: Jul 18, 2025

Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
High Prevalence of Plasmid-Mediated Quinolone Resistance among ESBL/AmpC-Producing Enterobacterales from Free-Living
Beata Furmanek-Blaszk1, Marian Sektas1, Bartosz Rybak2
1Department of Microbiology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, 80-308 Gdansk, Poland.
Abstract:
In this study, we investigated the occurrence of plasmid-mediated quinolone resistance (PMQR) in extended-spectrum β-lactamase- (ESBL) and/or AmpC-type β-lactamase-producing Enterobacterales isolates from free-living birds in Poland. The prevalence of the qnrB19 gene was 63%, and the distribution of isolates in terms of bacterial species was as follows: 67% (22/33) corresponded to Escherichia coli, 83% (5/6) to Rahnella aquatilis, 44% (4/9) to Enterobacter cloacae and 33% (1/3) to Klebsiella pneumoniae. The qnrB19 gene was also found in a single isolate of Citrobacter freundii. The molecular characteristics of qnrB19-positive isolates pointed to extended-spectrum beta lactamase CTX-M as the most prevalent one (89%) followed by TEM (47%), AmpC (37%) and SHV (16%). This study demonstrates the widespread occurrence of PMQR-positive and ESBL/AmpC-producing Enterobacterales isolates in fecal samples from wild birds. In this work, plasmid pAM1 isolated from Escherichia coli strain SN25556 was completely sequenced. This plasmid is 3191 nucleotides long and carries the qnrB19 gene, which mediates decreased susceptibility to quinolones. It shares extensive homology with other previously described small qnrB19-harboring plasmids. The nucleotide sequence of pAM1 showed a variable region flanked by an oriT locus and a Xer recombination site. The presence of a putative recombination site was detected, suggesting that interplasmid recombination events might have played a role in the development of pAM1. Our results highlight the broad geographical spread of ColE-type Qnr resistance plasmids in clinical and environmental isolates of Enterobacterales. As expected from the results of phenotypic susceptibility testing, no resistance genes other than qnrB19 were identified.
Insights
Plasmid-mediated quinolone resistance (PMQR) and extended-spectrum β-lactamase (ESBL) genes are widespread in wild birds. The qnrB19 gene was prevalent in Enterobacterales, indicating potential environmental reservoirs for antibiotic resistance.
Area of Science:
- Microbiology
- Genetics
- Environmental Science
Background:
- Antibiotic resistance is a growing global health concern.
- Extended-spectrum β-lactamase (ESBL) and AmpC-type β-lactamase producing Enterobacterales are significant pathogens.
- Plasmid-mediated quinolone resistance (PMQR) contributes to reduced susceptibility to fluoroquinolones.
Purpose of the Study:
- To investigate the occurrence of PMQR genes in ESBL/AmpC-producing Enterobacterales from free-living birds in Poland.
- To characterize the molecular features of resistance genes and plasmids.
- To assess the role of wild birds as reservoirs for antibiotic resistance genes.
Main Methods:
- Isolation and identification of Enterobacterales from fecal samples of wild birds.
- Detection of ESBL, AmpC, and PMQR genes using molecular methods.
- Whole-genome sequencing of selected isolates and plasmids.
- Plasmid characterization, including sequencing and homology analysis.
Main Results:
- The qnrB19 gene was detected in 63% of the isolates.
- Escherichia coli, Rahnella aquatilis, Enterobacter cloacae, and Klebsiella pneumoniae were the most common species carrying qnrB19.
- CTX-M was the most prevalent ESBL (89%), followed by TEM, AmpC, and SHV.
- Plasmid pAM1, carrying qnrB19, was sequenced and found to share homology with other small qnrB19-harboring plasmids.
- Evidence suggests interplasmid recombination may contribute to plasmid development.
Conclusions:
- Wild birds harbor a significant prevalence of PMQR and ESBL/AmpC-producing Enterobacterales.
- The qnrB19 gene is widespread in these avian isolates.
- Wild birds may act as environmental reservoirs and disseminators of antibiotic resistance genes.
- The findings highlight the broad geographical spread of ColE-type Qnr resistance plasmids.
More Related Videos
Related Concept Videos
Gene Regulation in Microbial Communities: Quorum Sensing
Development of Antibiotic Resistance
Antibiotic Selection
Plasmids

