CRISPR screens decode cancer cell pathways that trigger γδ T cell detection

Murad R Mamedov1,2, Shane Vedova3,4, Jacob W Freimer3,4,5

  • 1Gladstone-UCSF Institute of Genomic Immunology, San Francisco, CA, USA. murad.mamedov@ucsf.edu.

Nature
|August 30, 2023
PubMed

Insights

Gamma delta (γδ) T cells target cancer by recognizing stress signals. Activating AMP-activated protein kinase (AMPK) boosts cancer cell stress signals, enhancing γδ T cell killing.

Area of Science:

  • Immunology
  • Cancer Biology
  • Cellular Metabolism

Background:

  • γδ T cells are potent anticancer effectors recognizing conserved stress signals on transformed cells.
  • Vγ9Vδ2 T cells, a major human γδ T cell subset, recognize the BTN2A1-BTN3A1 complex on target cells.
  • Mechanisms linking cancer cell stress to γδ T cell targeting are not fully understood.

Purpose of the Study:

  • To identify pathways regulating γδ T cell killing and BTN3A expression in cancer cells.
  • To elucidate the role of cellular metabolism in γδ T cell-mediated cytotoxicity.
  • To explore therapeutic strategies for enhancing γδ T cell anticancer activity.

Main Methods:

  • Genome-wide CRISPR screens in target cancer cells.
  • Analysis of gene expression, protein modifications, and membrane trafficking.
  • Investigation of metabolic pathway disruptions and AMP-activated protein kinase (AMPK) signaling.
  • Assessment of Vγ9Vδ2 T cell killing in cell line and patient-derived tumor organoid models.

Main Results:

  • CRISPR screens revealed multilayered regulation of BTN3A cell surface expression and γδ T cell activation.
  • Disruption of cancer cell metabolic pathways, especially ATP production, altered BTN3A levels.
  • AMPK activation by metabolic stress induces BTN2A1 and BTN3A expression.
  • AMPK activation in cancer models increased BTN2A1-BTN3A complex expression and Vγ9Vδ2 T cell killing.

Conclusions:

  • Metabolic stress in cancer cells, mediated by AMPK, upregulates the BTN2A1-BTN3A complex.
  • This AMPK-dependent mechanism enhances Vγ9Vδ2 T cell recognition and killing of cancer cells.
  • Targeting metabolic pathways and activating AMPK offers a novel strategy to boost γδ T cell immunotherapy.

Related Concept Videos

CRISPR/Cas9 Genome Editing01:28

CRISPR/Cas9 Genome Editing

The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
49
Cancer-Critical Genes II: Tumor Suppressor Genes01:05

Cancer-Critical Genes II: Tumor Suppressor Genes

Genes usually encode proteins necessary for the proper functioning of a healthy cell. Mutations can often cause changes to the gene expression pattern, thereby altering the phenotype.
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...
7.5K
CRISPR01:59

CRISPR

Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
52.3K