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Updated: Jul 17, 2025

Isolation and Flow Cytometric Analysis of Glioma-infiltrating Peripheral Blood Mononuclear Cells
Published on: November 28, 2015
Immune checkpoint blockade induces distinct alterations in the microenvironments of primary and metastatic brain
Lu Sun1, Jenny C Kienzler1,2, Jeremy G Reynoso1
1Department of Neurosurgery, UCLA, Los Angeles, California, USA.
Abstract:
In comparison with responses in recurrent glioblastoma (rGBM), the intracranial response of brain metastases (BrM) to immune checkpoint blockade (ICB) is less well studied. Here, we present an integrated single-cell RNA-Seq (scRNA-Seq) study of 19 ICB-naive and 9 ICB-treated BrM samples from our own and published data sets. We compared them with our previously published scRNA-Seq data from rGBM and found that ICB led to more prominent T cell infiltration into BrM than rGBM. These BrM-infiltrating T cells exhibited a tumor-specific phenotype and displayed greater activated/exhausted features. We also used multiplex immunofluorescence and spatial transcriptomics to reveal that ICB reduced a distinct CD206+ macrophage population in the perivascular space, which may modulate T cell entry into BrM. Furthermore, we identified a subset of progenitor exhausted T cells that correlated with longer overall survival in BrM patients. Our study provides a comprehensive immune cellular landscape of ICB's effect on metastatic brain tumors and offers insights into potential strategies for improving ICB efficacy for brain tumor patients.
Insights
Immune checkpoint blockade (ICB) therapy increases T cell infiltration in brain metastases (BrM) more than in recurrent glioblastoma (rGBM). This therapy also reduces specific macrophages, potentially improving T cell entry and patient survival.
Area of Science:
- Neuro-oncology
- Immunotherapy
- Translational Research
Background:
- Intracranial response of brain metastases (BrM) to immune checkpoint blockade (ICB) is less understood than recurrent glioblastoma (rGBM).
- Understanding BrM immune microenvironment is crucial for optimizing ICB efficacy.
Purpose of the Study:
- To compare the immune cellular landscape of BrM and rGBM in response to ICB.
- To identify mechanisms influencing T cell infiltration and patient survival in BrM treated with ICB.
Main Methods:
- Integrated single-cell RNA-Seq (scRNA-Seq) analysis of ICB-naive and ICB-treated BrM samples.
- Comparison with scRNA-Seq data from rGBM.
- Multiplex immunofluorescence and spatial transcriptomics to analyze macrophage populations and spatial architecture.
Main Results:
- ICB induced greater T cell infiltration into BrM compared to rGBM.
- BrM-infiltrating T cells showed tumor-specific, activated/exhausted phenotypes.
- ICB reduced CD206+ macrophages in the perivascular space, potentially facilitating T cell entry.
- A progenitor exhausted T cell subset correlated with improved overall survival in BrM patients.
Conclusions:
- ICB reshapes the immune microenvironment of BrM, enhancing T cell infiltration.
- Targeting specific macrophage populations may improve ICB effectiveness in brain tumors.
- Identification of prognostic T cell subsets offers potential therapeutic strategies for BrM.
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