Related Experiment Video
Updated: Jul 17, 2025

04:52
Following the Dynamics of Structural Variants in Experimentally Evolved Populations
Published on: February 3, 2023
1.0K
Self-loops in evolutionary graph theory: Friends or foes?
Nikhil Sharma1, Sedigheh Yagoobi1, Arne Traulsen1
1Department of Theoretical Biology, Max Planck Institute for Evolutionary Biology, Plön, Germany.
Plos Computational Biology
|September 1, 2023
Summary
Self-loops amplify selection in structured populations at low mutation rates. However, at higher mutation rates, these self-loops become detrimental, reducing average fitness compared to well-mixed populations.
Area of Science:
- Evolutionary biology
- Mathematical modeling
- Population genetics
Background:
- Spatially structured populations influence evolutionary dynamics.
- Structures can amplify selection, favoring beneficial mutations and hindering deleterious ones.
- Self-loops are crucial for selection amplification in dynamic, mutant-prone structures at low mutation rates.
Purpose of the Study:
- Investigate the impact of increasing mutation rates on selection amplification in structured populations.
- Determine the effects of self-loops on evolutionary dynamics beyond the low mutation rate regime.
- Identify the mutation rate threshold where weak mutation approximations fail.
Main Methods:
- Analysis of evolutionary dynamics on graphs with varying structures and mutation rates.
- Comparison of steady-state average fitness between different population structures (self-looped, complete graph, suppressors).
- Calculation of average fixation time scaling with population size to estimate mutation rate deviations.
Main Results:
- Self-loops enhance selection amplification at low mutation rates, leading to higher average fitness.
- At intermediate and high mutation rates, self-loops become detrimental, reducing average fitness compared to complete graphs.
- The study provides an estimate for the mutation rate beyond which weak mutation approximations become inaccurate.
Conclusions:
- The effectiveness of self-looped structures in amplifying selection is highly dependent on the mutation rate.
- Beyond a critical mutation rate, the benefits of self-loops diminish, and they can negatively impact evolutionary outcomes.
- Understanding these mutation rate dependencies is crucial for accurately modeling evolutionary dynamics in structured populations.
Related Concept Videos
Evolutionary Relationships through Genome Comparisons
5.8K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
5.8K
Phylogenetic Trees
45.4K
Phylogenetic trees come in many forms. It matters in which sequence the organisms are arranged from the bottom to the top of the tree, but the branches can rotate at their nodes without altering the information. The lines connecting individual nodes can be straight, angled, or even curved.
45.4K
Gene Evolution - Fast or Slow?
7.2K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
7.2K
Synteny and Evolution
3.3K
John H. Renwick first coined the term “synteny” in 1971, which refers to the genes present on the same chromosomes, even if they are not genetically linked. The species with common ancestry tend to show conserved syntenic regions. Therefore, the concept of synteny is nowadays used to describe the evolutionary relationship between species.
Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral...
Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral...
3.3K
Phylogeny
44.3K
Phylogeny is concerned with the evolutionary diversification of organisms or groups of organisms. A group of organisms with a name is called a taxon (singular). Taxa (plural) can span different levels of the evolutionary hierarchy. For instance, the group containing all birds is a taxon (comprising the class Aves), and the group of all species of daisies (the genus Bellis) is a taxon. Phylogenies can likewise include just one genus (i.e., depict species relationships) or span an entire kingdom.
44.3K
Sequence Networks of Rotating Machines
123
A Y-connected synchronous generator, grounded through a neutral impedance, is designed to produce balanced internal phase voltages with only positive-sequence components. The generator's sequence networks include a source voltage that is exclusively in the positive-sequence network. The sequence components of line-to-ground voltages at the generator terminals illustrate this configuration.
Zero-sequence current induces a voltage drop across the generator's neutral impedance and other...
Zero-sequence current induces a voltage drop across the generator's neutral impedance and other...
123

