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Evaluation of pediatric epigenetic clocks across multiple tissues
Fang Fang1, Linran Zhou2, Wei Perng3
1GenOmics and Translational Research Center, RTI International, Research Triangle Park, 3040 East Cornwallis Road, Durham, NC, 27709-2194, USA. ffang@rti.org.
Clinical Epigenetics
|September 2, 2023
Summary
Pediatric epigenetic clocks accurately determine biological age. Different clocks show varying performance across tissues, with specific recommendations for blood, placenta, and buccal cells in children.
Area of Science:
- Epigenetics
- Genomics
- Biotechnology
Background:
- Epigenetic clocks are emerging as powerful tools for estimating biological age.
- Accurate assessment of biological age is crucial in pediatric populations.
Purpose of the Study:
- To evaluate the accuracy of pediatric epigenetic clocks for determining gestational and chronological age.
- To compare the performance of various epigenetic clocks across different pediatric tissue types.
Main Methods:
- Analysis of DNA methylation data from seven tissue types using three microarrays.
- Comparative assessment of established pediatric epigenetic clocks.
Main Results:
- The Knight and Bohlin clocks demonstrated similar accuracy in blood cells.
- The Lee clock showed superior performance in placental samples.
- The pediatric-buccal-epigenetic clock was optimal for buccal samples.
- The Horvath clock is recommended for pediatric blood cells.
- The NeoAge clock accurately predicted post-menstrual age in infant buccal cells.
Conclusions:
- The study provides essential guidance for selecting appropriate epigenetic clocks in pediatric research.
- Findings facilitate more precise biological age assessments in children using epigenetic data.
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