Characterization of circRNAs in established osimertinibresistant nonsmall cell lung cancer cell lines

Xin Chen1, Jingyao Gu1, Jiali Huang2

  • 1Cancer Medical Center, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu 210011, P.R. China.

Insights

Drug resistance to osimertinib is a major challenge in non-small cell lung cancer (NSCLC) treatment. This study established resistant cell lines and identified circular RNAs (circRNAs) as potential biomarkers for overcoming osimertinib resistance.

Area of Science:

  • Oncology
  • Molecular Biology
  • Genetics

Background:

  • Drug resistance to osimertinib, a third-generation EGFR-tyrosine kinase inhibitor, is a significant obstacle in treating non-small cell lung cancer (NSCLC).
  • Limited availability of osimertinib-resistant cell lines hinders preclinical research into resistance mechanisms.
  • Understanding these mechanisms is crucial for developing strategies to improve patient outcomes and treatment efficacy.

Purpose of the Study:

  • To establish and characterize osimertinib-resistant NSCLC cell lines.
  • To investigate the molecular mechanisms underlying osimertinib resistance, focusing on protein expression and circular RNA profiles.
  • To explore the potential of circular RNAs as biomarkers for osimertinib resistance in NSCLC.

Main Methods:

  • Establishment of osimertinib-resistant cell lines (HCC827-OR, H1975-OR) through gradual drug concentration increase.
  • Evaluation of resistance using IC50, cell morphology, whole exon sequencing, CCK-8 assay, EdU staining, and flow cytometry.
  • Western blot analysis for key protein expression (p-AKT, p-ERK) and RNA sequencing (RNA-seq) for circRNA profiling.

Main Results:

  • Successfully established osimertinib-resistant NSCLC cell lines with significantly higher IC50 and proliferation rates compared to sensitive cells.
  • Activated p-AKT and p-ERK signaling pathways were observed in resistant cells, with diminished sensitivity to osimertinib's inhibitory effects.
  • RNA-seq identified differentially expressed circRNAs, with circPDLIM5 and circPPP4R1 highlighted, and pathway analysis linked host genes to 'endocytosis' and 'regulation of autophagy'.

Conclusions:

  • Osimertinib-resistant NSCLC cell lines were successfully generated, providing valuable tools for resistance research.
  • Dysregulated circRNAs, particularly circPDLIM5 and circPPP4R1, are implicated in NSCLC osimertinib resistance.
  • Circular RNAs show promise as potential biomarkers for predicting and potentially overcoming osimertinib resistance in NSCLC patients.