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Specificity Analysis of Protein Lysine Methyltransferases Using SPOT Peptide Arrays
Published on: November 29, 2014
Structure based functional annotation of a MYND-less lysine methyl transferase inCandida albicans
Joydeb Dey1, Himanshu Kishore Prasad1
1Department of Life Science and Bioinformatics, Assam University, Silchar, Assam-788011, India.
Abstract:
Candida albicans is opportunistic pathogenic yeast that is widely distributed throughout the world and is classified as the most critical fungal pathogen group. Candida albicans is a common microbiota of healthy individuals but can cause superficial and invasive infections in immune compromised individuals. Protein Post-translational modifications involving methylation of lysine amino acids stand for a major regulator of eukaryotic transcription, and pathways controlling several cellular processes. SMYD makes up a SET (Su (Var) 3-9, Enhancer-of-zeste and Trithorax) and MYND (Myeloid, Nervy, and DEAF-1) domain containing lysine methyl transferase subfamily that transfers methyl groups from methyl donors onto lysine residues in histones (H3 and H4) and non-histone proteins. The SET domain is the methyltransferase catalytic domain, while MYND participates in both protein and DNA interactions. Well-studied examples of SMYD proteins are five human and two Saccharomyces cerevisiae, constituting examples of histone and non-histone protein lysine methyl transferase members. However, there is limited understanding of SET lysine methyltransferases, including the SMYD subfamily, in the pathogenic fungi Candida albicans. Using bioinformatics tools, we characterized the SMYD domain containing proteins in the important pathogen. We report the presence of an atypical SMYD member (CaO19.3863) as a new lysine methyltransferase that can be a target for antifungal therapy.
Insights
This study identifies a novel lysine methyltransferase in Candida albicans, an opportunistic fungal pathogen. This finding offers a potential new target for antifungal therapies against Candida infections.
Area of Science:
- Mycology
- Molecular Biology
- Biochemistry
Background:
- * *Candida albicans* is a globally prevalent opportunistic fungal pathogen causing infections in immunocompromised individuals.
- * Protein lysine methylation, regulated by SMYD proteins, is crucial for eukaryotic cellular processes.
- * Limited knowledge exists on SMYD subfamily lysine methyltransferases in *Candida albicans*.
Purpose of the Study:
- * To characterize SMYD domain-containing proteins in *Candida albicans*.
- * To identify potential novel targets for antifungal drug development.
Main Methods:
- * Bioinformatics analysis of SMYD domain-containing proteins in *Candida albicans*.
Main Results:
- * Identification of an atypical SMYD member (CaO19.3863) in *Candida albicans*.
- * This protein functions as a novel lysine methyltransferase.
- * The identified protein represents a potential target for antifungal interventions.
Conclusions:
- * The characterization of SMYD proteins in *Candida albicans* expands our understanding of fungal post-translational modifications.
- * The novel lysine methyltransferase identified presents a promising avenue for developing new antifungal therapies against *Candida albicans* infections.

