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ATPase-regulated autophagosome biogenesis.

Viola Nähse1,2,3, Kay O Schink1,4, Harald Stenmark1,2

  • 1Centre for Cancer Cell Reprogramming, Faculty of Medicine, University of Oslo, montebello, Oslo Norway.

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|September 18, 2023
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Summary

ZFYVE1 protein

Keywords:
AggrephagyAtpaseautophagosomemicronucleophagymitophagyomegasome

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Area of Science:

  • Cell Biology
  • Molecular Biology

Background:

  • Omegasomes, endoplasmic reticulum structures, are implicated in autophagosome biogenesis.
  • The precise function of ZFYVE1/DFCP1 in omegasomes and autophagy remains unclear.
  • ZFYVE1 depletion does not impede bulk autophagy, posing a paradox.

Purpose of the Study:

  • To investigate the role of ZFYVE1's ATPase domain in omegasome function and autophagy.
  • To elucidate the mechanism by which ZFYVE1 regulates omegasome constriction and autophagosome completion.

Main Methods:

  • Site-directed mutagenesis of ZFYVE1's ATPase domain.
  • Analysis of omegasome morphology, expansion, and maturation.
  • Assessment of bulk and selective autophagy in ZFYVE1 knockout/mutant cells.

Main Results:

  • ZFYVE1 dimerization is regulated by ATP binding and hydrolysis.
  • Mutations affecting ATP binding/hydrolysis inhibit omegasome constriction but not expansion.
  • Selective autophagy pathways (mitophagy, aggregate clearance) are impaired in ZFYVE1 mutants, unlike bulk autophagy.

Conclusions:

  • ZFYVE1's ATPase activity is crucial for omegasome constriction and autophagosome completion.
  • ATP-dependent ZFYVE1 conformational changes likely provide energy for omegasome dynamics.
  • ZFYVE1 regulates selective autophagy, highlighting its specific role beyond bulk autophagy.