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Analyses of Proteinuria, Renal Infiltration of Leukocytes, and Renal Deposition of Proteins in Lupus-prone MRL/lpr Mice
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Systemic lupus erythematosus with high disease activity identification based on machine learning.
Da-Cheng Wang1, Wang-Dong Xu2, Zhen Qin3
1Department of Evidence-Based Medicine, Southwest Medical University, 1 Xianglin Road, Luzhou, 646000, Sichuan, China.
Summary
This study developed a machine learning model to identify systemic lupus erythematosus (SLE) patients with high disease activity. The LGB model, using features like proteinuria and hematuria, achieved high accuracy in identifying high disease activity in SLE patients.
Area of Science:
- Medical informatics
- Machine learning in healthcare
- Rheumatology
Background:
- Clinical evaluation of systemic lupus erythematosus (SLE) disease activity is challenging and inconsistent.
- High disease activity in SLE significantly impacts patient outcomes.
Purpose of the Study:
- To develop a machine learning model for identifying SLE patients with high disease activity.
- To improve the accuracy and consistency of SLE disease activity assessment.
Main Methods:
- Utilized data from 1014 low-activity and 453 high-activity SLE patients.
- Collected 94 clinical, laboratory, and 17 meteorological indicators.
- Employed mutual information and multisurf for feature selection, followed by machine learning modeling (LGB, Naive Bayes).
Main Results:
- Integrated feature selection identified key indicators: hematuria, proteinuria, pyuria, low complement, precipitation, and sunlight.
- The LGB model demonstrated superior performance with an ROC AUC of 0.930 and PRC AUC of 0.911.
- Feature selection consistency was confirmed in the composite feature importance bar plot.
Conclusions:
- A straightforward machine learning pipeline effectively identifies SLE patients with high disease activity.
- The LGB model, leveraging selected features like proteinuria and hematuria, shows significant promise for clinical application.
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