Related Experiment Video
Updated: Jul 15, 2025

Comprehensive DNA Methylation Analysis Using a Methyl-CpG-binding Domain Capture-based Method in Chronic Lymphocytic Leukemia Patients
Published on: June 16, 2017
[DNA Methylation Profile of CD14+ Monocytes Changes in Primary Progressive Multiple Sclerosis]
I S Kiselev1,2, O G Kulakova1, O A Baturina3
1Pirogov Russian National Research Medical University, Moscow, 117997 Russia.
Abstract:
Multiple sclerosis (MS) is a chronic autoimmune inflammatory and neurodegenerative disease of the central nervous system, which is characterized by significant clinical heterogeneity. Primary progressive MS (PPMS) develops in 10-15% of patients. Unlike the most common relapsing-remitting form of MS, PPMS involves steady progress of neurodegeneration and, as a consequence, a persistent gradual increase in neurological symptoms. The peculiarities of epigenetic regulation of gene expression may be one of the reasons for the differences in the pathogenesis of the two MS forms. DNA methylation is one of the key epigenetic mechanisms, which remains almost unexplored in different cell populations of PPMS patients. The goal of this work was to identify differential methylation profiles of the CpG sites in the CD14+ monocyte DNA, which characterize PPMS. A genome-wide analysis of DNA methylation in PPMS patients and healthy individuals has identified 169 differentially methylated positions (DMPs), 90.5% of which were hypermethylated in PPMS patients. More than half of all DMPs are located in/near known genes and within CpG islands and their neighboring regions, which indicates their high functional significance. We have found six differentially methylated regions (DMRs) in the OR2L13, CAT, LCLAT1, HOXA5, RNF39, and CRTAC1 genes involved in inflammation and neurodegeneration, which indicates active epigenetic regulation of their expression.
Insights
Primary progressive multiple sclerosis (PPMS) shows distinct DNA methylation patterns in monocytes. Most differentially methylated positions were hypermethylated, suggesting epigenetic dysregulation in this MS subtype.
Area of Science:
- Neuroimmunology
- Epigenetics
- Genomics
Context:
- Multiple sclerosis (MS) is a heterogeneous neurodegenerative disease.
- Primary progressive MS (PPMS) presents unique challenges due to steady neurodegeneration.
- Epigenetic regulation, specifically DNA methylation, is under-explored in PPMS pathogenesis.
Purpose:
- To identify differential DNA methylation profiles in CD14+ monocytes of PPMS patients.
- To investigate the role of epigenetic modifications in PPMS compared to healthy individuals.
Summary:
- Genome-wide analysis revealed 169 differentially methylated positions (DMPs) in PPMS patients' monocytes.
- Over 90% of these DMPs were hypermethylated in PPMS.
- Six differentially methylated regions (DMRs) were identified in genes linked to inflammation and neurodegeneration (OR2L13, CAT, LCLAT1, HOXA5, RNF39, CRTAC1).
Impact:
- Highlights the functional significance of epigenetic alterations in PPMS.
- Suggests active epigenetic regulation of genes involved in inflammation and neurodegeneration in PPMS.
- Provides a foundation for understanding PPMS pathogenesis and developing targeted epigenetic therapies.

