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Published on: August 15, 2019
Difference in Clinical Phenotype, Mutation Position, and Structural Change of RNF213 Rare Variants Between Pediatric
Shunsuke Nomura1,2,3, Hiroyuki Akagawa4, Koji Yamaguchi5
1Department of Neurosurgery, Tokyo Women's Medical University Yachiyo Medical Center, Owadashinden, Yachiyo-Shi, Chiba, 477-96, Japan. shunsukesn20@gmail.com.
Abstract:
It is unclear how rare RNF213 variants, other than the p.R4810K founder variant, affect the clinical phenotype or the function of RNF213 in moyamoya disease (MMD). This study included 151 Japanese patients with MMD. After performing targeted resequencing for all coding exons in RNF213, we investigated the clinical phenotype and statistically analyzed the genotype-phenotype correlation. We mapped RNF213 variants on a three-dimensional (3D) model of human RNF213 and analyzed the structural changes due to variants. The RNF213 p.R4810K homozygous variant, p.R4810K heterozygous variant, and wild type were detected in 10 (6.6%), 111 (73.5%), and 30 (19.9%) MMD patients, respectively. In addition, 15 rare variants were detected in 16 (10.6%) patients. In addition to the influence of the p.R4810K homozygous variant, the frequency of cerebral infarction at disease onset was higher in pediatric patients with other rare variants (3/6, 50.0%, P = 0.006) than in those with only the p.R4810K heterozygous variant or with no variants (2/51, 3.9%). Furthermore, on 3D modelling of RNF213, the majority of rare variants found in pediatric patients were located in the E3 module and associated with salt bridge loss, contrary to the results for adult patients. The clinical phenotype of rare RNF213 variants, mapped mutation position, and their predicted structural change differed between pediatric and adult patients with MMD. Rare RNF213 variants, in addition to the founder p.R4810K homozygous variant, can influence MMD clinical phenotypes or structural change which may contribute to the destabilization of RNF213.
Insights
Rare RNF213 variants, beyond the common p.R4810K, impact moyamoya disease (MMD) phenotypes. Pediatric patients with these rare variants show increased stroke risk and distinct structural changes in RNF213.
Area of Science:
- Genetics
- Neurology
- Biochemistry
Background:
- Moyamoya disease (MMD) is a rare cerebrovascular disorder.
- The RNF213 gene, particularly the p.R4810K variant, is strongly associated with MMD.
- The impact of rare RNF213 variants beyond p.R4810K on MMD remains unclear.
Purpose of the Study:
- To investigate the clinical phenotypes associated with rare RNF213 variants in MMD patients.
- To analyze the genotype-phenotype correlation of these variants.
- To explore the structural impact of rare variants on the RNF213 protein using 3D modeling.
Main Methods:
- Targeted resequencing of all coding exons of the RNF213 gene in 151 Japanese MMD patients.
- Clinical phenotype investigation and statistical genotype-phenotype correlation analysis.
- Three-dimensional (3D) modeling of human RNF213 to assess structural changes caused by variants.
Main Results:
- The p.R4810K homozygous variant was found in 6.6%, heterozygous in 73.5%, and wild type in 19.9% of patients.
- Fifteen rare variants were identified in 10.6% of patients.
- Pediatric patients with rare variants (excluding p.R4810K homozygous) showed a significantly higher frequency of cerebral infarction at onset (50.0%) compared to those with only heterozygous p.R4810K or no variants (3.9%).
- Rare variants in pediatric patients were predominantly located in the E3 module, causing salt bridge loss, unlike in adult patients.
- Clinical phenotypes and structural changes differed between pediatric and adult MMD patients with rare RNF213 variants.
Conclusions:
- Rare RNF213 variants, in addition to the founder p.R4810K variant, significantly influence MMD clinical phenotypes.
- These rare variants can cause structural destabilization of the RNF213 protein.
- Distinct genotype-phenotype correlations and structural impacts exist for rare variants in pediatric versus adult MMD patients.
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