Telomeric DNA breaks in human induced pluripotent stem cells trigger ATR-mediated arrest and telomerase-independent

Katrina N Estep1,2, John W Tobias3, Rafael J Fernandez1

  • 1Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.

PubMed

Insights

Human stem cells use homologous recombination (HR) to repair telomere DNA breaks, independent of telomerase. This process maintains telomere length and cell survival, revealing a distinct stem cell response to DNA damage.

Area of Science:

  • Stem cell biology
  • DNA repair mechanisms
  • Telomere biology

Background:

  • Mechanisms of telomere protection are understood in differentiated cells, but poorly characterized in stem cells.
  • How stem cells sense and respond to telomere dysfunction, specifically telomeric double-strand breaks (DSBs), remains unclear.

Purpose of the Study:

  • To investigate DNA damage signaling, cell cycle, and transcriptome changes in human induced pluripotent stem cells (iPSCs) after inducing telomere-internal DSBs.
  • To elucidate the roles of telomerase and homologous recombination (HR) in iPSC response to telomeric DSBs.

Main Methods:

  • Engineered human iPSCs with an inducible TRF1-FokI fusion protein to create acute DSBs at telomeres.
  • Utilized CRISPR-Cas9 to inactivate telomerase reverse transcriptase.
  • Analyzed DNA damage response, cell cycle arrest, and telomere repair pathways.

Main Results:

  • Induced telomeric DSBs activated an ATR-dependent DNA damage response, causing p53-independent G2 cell cycle arrest.
  • Telomerase was dispensable for survival and repair of TRF1-FokI-induced telomeric breaks.
  • Homologous recombination (HR) effectively repaired telomeric DSBs, maintaining normal telomere length and cell survival.
  • Unlike mouse embryonic stem cells, HR in iPSCs maintained telomere length without extension.

Conclusions:

  • Homologous recombination plays a significant role in telomere maintenance in telomerase-positive iPSCs.
  • iPSCs exhibit unique responses to targeted telomeric DNA damage compared to other stem cells.
  • The findings highlight a novel mechanism for telomere maintenance in human pluripotent stem cells.

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