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Updated: Jul 15, 2025

Using Neuron Spiking Activity to Trigger Closed-Loop Stimuli in Neurophysiological Experiments
Published on: November 12, 2019
Spiking Recurrent Neural Networks Represent Task-Relevant Neural Sequences in Rule-Dependent Computation
Xiaohe Xue1, Ralf D Wimmer2, Michael M Halassa2
1Courant Institute of Mathematical Sciences, New York University, New York, NY, USA.
Background:
Prefrontal cortical neurons play essential roles in performing rule-dependent tasks and working memory-based decision making.
Methods:
Motivated by PFG recordings of task-performing mice, we developed an excitatory-inhibitory spiking recurrent neural network (SRNN) to perform a rule-dependent two-alternative forced choice (2AFC) task. We imposed several important biological constraints onto the SRNN, and adapted spike frequency adaptation (SFA) and SuperSpike gradient methods to train the SRNN efficiently.
Results:
The trained SRNN produced emergent rule-specific tunings in single-unit representations, showing rule-dependent population dynamics that resembled experimentally observed data. Under varying test conditions, we manipulated the SRNN parameters or configuration in computer simulations, and we investigated the impacts of rule-coding error, delay duration, recurrent weight connectivity and sparsity, and excitation/inhibition (E/I) balance on both task performance and neural representations.
Conclusions:
Overall, our modeling study provides a computational framework to understand neuronal representations at a fine timescale during working memory and cognitive control, and provides new experimentally testable hypotheses in future experiments.
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