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Related Concept Videos

Ribosome Profiling02:24

Ribosome Profiling

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Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
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Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
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RNA-seq03:21

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RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases. 
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Related Experiment Video

Updated: Jul 14, 2025

A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations
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HybriSeq: Probe-based Device-free Single-cell RNA Profiling.

Daniel Foyt1, David Brown2, Shuqin Zhou2

  • 1UCSF-UC Berkeley Joint Graduate Program in Bioengineering, University of California San Francisco, San Francisco, California, 94143, United States of America.

Biorxiv : the Preprint Server for Biology
|October 9, 2023
PubMed
Summary
This summary is machine-generated.

We developed HybriSeq, a sensitive single-cell RNA profiling method using in situ hybridization and sequencing. This technique characterizes cell heterogeneity and detects splicing variations and misannotated transcripts.

Area of Science:

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  • Molecular Biology
  • Genomics
  • Biotechnology
  • Background:

    • Single-cell RNA profiling is crucial for understanding cellular heterogeneity.
    • Existing methods may face limitations in sensitivity and scope for targeted transcript analysis.

    Conclusions:

    • HybriSeq offers a sensitive and versatile approach for targeted single-cell RNA profiling.
    • This method enhances the characterization of cellular heterogeneity and transcript integrity.