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Updated: May 21, 2026

Establishing 3-Dimensional Spheroids from Patient-Derived Tumor Samples and Evaluating their Sensitivity to Drugs
Published on: December 16, 2022
Effect of Polyplex Size on Penetration into Tumor Spheroids
Cristina Casadidio1,2, Jet E M Hartman1, Bárbara S Mesquita1
1Department of Pharmaceutical Sciences, Division of Pharmaceutics, Utrecht Institute for Pharmaceutical Sciences (UIPS), Utrecht University 99, 3508 TB Utrecht, The Netherlands.
Abstract:
Ovarian cancer is one of the most lethal gynecological cancers in the world. In recent years, nucleic acid (NA)-based formulations have been shown to be promising treatments for ovarian cancer, including tumor nodules. However, gene therapy is not that far advanced in clinical reality due to unfavorable physicochemical properties of the NAs, such as high molecular weight, poor cellular uptake, rapid degradation by nucleases, etc. One of the strategies used to overcome these drawbacks is the complexation of anionic NAs via electrostatic interactions with cationic polymers, resulting in the formation of so-called polyplexes. In this work, the role of the size of pDNA and siRNA polyplexes on their penetration into ovarian-cancer-based tumor spheroids was investigated. For this, a methoxypoly(ethylene glycol) poly(2-(dimethylamino)ethyl methacrylate) (mPEG-pDMAEMA) diblock copolymer was synthesized as a polymeric carrier for NA binding and condensation with either plasmid DNA (pDNA) or short interfering RNA (siRNA). When prepared in HEPES buffer (10 mM, pH 7.4) at a nitrogen/phosphate (N/P) charge ratio of 5 and pDNA polyplexes were formed with a size of 162 ± 11 nm, while siRNA-based polyplexes displayed a size of 25 ± 2 nm. The polyplexes had a slightly positive zeta potential of +7-8 mV in the same buffer. SiRNA and pDNA polyplexes were tracked in vitro into tumor spheroids, resembling in vivo avascular ovarian tumor nodules. For this purpose, reproducible spheroids were obtained by coculturing ovarian carcinoma cells with primary mouse embryonic fibroblasts in different ratios (5:2, 1:1, and 2:5). Penetration studies revealed that after 24 h of incubation, siRNA polyplexes were able to penetrate deeper into the homospheroids (composed of only cancer cells) and heterospheroids (cancer cells cocultured with fibroblasts) compared to pDNA polyplexes which were mainly located in the rim. The penetration of the polyplexes was slowed when increasing the fraction of fibroblasts present in the spheroids. Furthermore, in the presence of serum siRNA polyplexes encoding for luciferase showed a high cellular uptake in 2D cells resulting in ∼50% silencing of luciferase expression. Taken together, these findings show that self-assembled small siRNA polyplexes have good potential as a platform to test ovarian tumor nodulus penetration..
Insights
Small siRNA polyplexes penetrate ovarian tumor spheroids more effectively than larger pDNA polyplexes. These findings highlight the potential of small siRNA polyplexes for ovarian cancer gene therapy delivery and penetration studies.
Area of Science:
- Biomedical Engineering
- Nanotechnology
- Oncology
Background:
- Ovarian cancer remains a leading cause of cancer-related deaths globally.
- Nucleic acid (NA)-based therapies show promise for ovarian cancer treatment but face challenges like poor cellular uptake and degradation.
- Polyplex formation via electrostatic complexation of NAs with cationic polymers is a strategy to improve NA delivery.
Purpose of the Study:
- To investigate the impact of polyplex size on penetration into ovarian cancer tumor spheroids.
- To evaluate the potential of methoxypoly(ethylene glycol) poly(2-(dimethylamino)ethyl methacrylate) (mPEG-pDMAEMA) as a carrier for plasmid DNA (pDNA) and short interfering RNA (siRNA) polyplexes.
- To assess the in vitro efficacy of siRNA polyplexes in gene silencing within ovarian cancer models.
Main Methods:
- Synthesis of mPEG-pDMAEMA diblock copolymer for NA complexation.
- Preparation of pDNA and siRNA polyplexes with defined sizes (pDNA: 162 nm, siRNA: 25 nm) and positive zeta potential (+7-8 mV).
- Generation of ovarian cancer spheroids (homo- and heterospheroids) using co-culture techniques.
- In vitro tracking and penetration studies of polyplexes within spheroids over 24 hours.
- Assessment of siRNA polyplex-mediated gene silencing in 2D cell cultures.
Main Results:
- Smaller siRNA polyplexes demonstrated significantly deeper penetration into both homospheroids and heterospheroids compared to larger pDNA polyplexes.
- Polyplex penetration was hindered by an increasing proportion of fibroblasts within the spheroids.
- siRNA polyplexes exhibited high cellular uptake in 2D cultures, achieving approximately 50% silencing of luciferase expression in the presence of serum.
Conclusions:
- Self-assembled small siRNA polyplexes show superior penetration capabilities in ovarian tumor models.
- The size of polyplexes is a critical factor influencing their ability to penetrate tumor spheroids.
- Small siRNA polyplexes represent a promising platform for investigating ovarian tumor nodule penetration and developing targeted gene delivery strategies.

