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Updated: Jul 13, 2025

Flow Cytometric Analysis of Biomarkers for Detecting Human Sperm Functional Defects
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Improved age estimation from semen using sperm-specific age-related CpG markers.

Chao Xiao1, Ya Li2, Maomin Chen2

  • 1Department of Forensic Medicine, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei 430030, PR China; Hubei Key Laboratory of the Forensic Science, Hubei University of Police, Wuhan, Hubei 430035, PR China.

Forensic Science International. Genetics
|October 11, 2023
PubMed
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This study developed sperm-specific age-related CpG markers for accurate age estimation from sperm DNA, improving forensic investigations. The new method offers a more precise tool for narrowing suspect pools in sexual assault cases.

Area of Science:

  • Forensic Science
  • Genetics
  • Molecular Biology

Background:

  • Accurate age estimation from semen is crucial for sexual assault investigations.
  • Previous semen age estimation methods using age-related CpG (AR-CpG) markers were less accurate than blood-based methods.
  • Interference from non-sperm cells in semen likely caused lower accuracy in prior studies.

Purpose of the Study:

  • To develop age calculators using sperm-specific AR-CpG markers.
  • To improve age estimation accuracy from sperm DNA.
  • To provide a more reliable forensic tool for age determination.

Main Methods:

  • Analyzed public MethylationEPIC microarray data from 90 sperm samples (ages 22-51).
  • Identified 31 sperm-specific AR-CpG markers and integrated top markers into two SNaPshot panels.
Keywords:
Age estimationCpG markerDNA methylationForensic scienceSemen

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  • Validated 21 AR-CpG markers in an independent cohort of 253 sperm DNA samples (ages 22-67).
  • Main Results:

    • Developed optimal age estimation models for sperm DNA with mean absolute errors (MAEs) as low as 2.526 years.
    • Simplified models with fewer markers still outperformed previous methods (e.g., MAE of 2.918 years for sperm).
    • Markers demonstrated 100% accuracy in distinguishing sperm/semen from blood.

    Conclusions:

    • Sperm-specific AR-CpG markers enable precise age estimation from sperm DNA.
    • The developed markers and models offer an improved toolset for forensic science.
    • This research enhances the potential for accurate age determination in legal investigations.