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Updated: Jul 13, 2025

Characterization of Membrane Transporters by Heterologous Expression in E. coli and Production of Membrane Vesicles
Published on: December 31, 2019
Structural basis of promiscuous substrate transport by Organic Cation Transporter 1
Yi C Zeng1,2, Meghna Sobti3,4, Ada Quinn5
1Molecular, Structural and Computational Biology Division, The Victor Chang Cardiac Research Institute, Darlinghurst, NSW, Australia. y.zeng@victorchang.edu.au.
Abstract:
Organic Cation Transporter 1 (OCT1) plays a crucial role in hepatic metabolism by mediating the uptake of a range of metabolites and drugs. Genetic variations can alter the efficacy and safety of compounds transported by OCT1, such as those used for cardiovascular, oncological, and psychological indications. Despite its importance in drug pharmacokinetics, the substrate selectivity and underlying structural mechanisms of OCT1 remain poorly understood. Here, we present cryo-EM structures of full-length human OCT1 in the inward-open conformation, both ligand-free and drug-bound, indicating the basis for its broad substrate recognition. Comparison of our structures with those of outward-open OCTs provides molecular insight into the alternating access mechanism of OCTs. We observe that hydrophobic gates stabilize the inward-facing conformation, whereas charge neutralization in the binding pocket facilitates the release of cationic substrates. These findings provide a framework for understanding the structural basis of the promiscuity of drug binding and substrate translocation in OCT1.
Insights
Researchers uncovered the structural basis of Organic Cation Transporter 1 (OCT1)
Area of Science:
- Biochemistry and structural biology
- Pharmacology and drug discovery
Background:
- Organic Cation Transporter 1 (OCT1) is vital for hepatic drug and metabolite uptake.
- Genetic variations in OCT1 impact drug efficacy and safety across various therapeutic areas.
- Understanding OCT1's substrate selectivity and transport mechanisms is crucial for drug development.
Purpose of the Study:
- To elucidate the structural mechanisms underlying OCT1's broad substrate recognition.
- To provide molecular insights into the alternating access transport mechanism of OCT1.
- To explain the structural basis for OCT1's promiscuous drug binding.
Main Methods:
- Cryo-electron microscopy (cryo-EM) was used to determine the structures of full-length human OCT1.
- Structures were obtained in both ligand-free and drug-bound states, capturing the inward-open conformation.
- Comparative structural analysis with outward-open OCTs was performed.
Main Results:
- The cryo-EM structures reveal the inward-open conformation of human OCT1.
- Hydrophobic gates were identified as key stabilizers of the inward-facing state.
- Charge neutralization within the binding pocket was observed to facilitate cationic substrate release.
- The structures provide a molecular basis for OCT1's broad substrate recognition.
Conclusions:
- The study reveals the structural determinants of OCT1's substrate selectivity and transport.
- These findings offer a molecular framework for understanding drug interactions with OCT1.
- The insights gained can aid in the rational design of drugs targeting OCT1.
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