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DFT, Molecular Docking, Bioactivity and ADME Analyses of Vic-dioxim Ligand Containing Hydrazone Group and its Zn(II)
1Department of Physics, Faculty of Sciences, Aydın Adnan Menderes University, Aydın, Turkey.
Background:
Cancer is one of the diseases affecting a large population worldwide and resulting in death. Finding new anti-cancer drugs that are target-focused and have low toxicity is of great importance.
Objective:
This study aimed to investigate the effects of vic-dioxime derivatives carrying hydrazone group and its Zn(II) complex on cancer using molecular docking, bioactivity and quantum chemical calculations.
Methods:
Molecular docking studies were performed on epidermal growth factor receptor and vascular endothelial growth factor receptor 2 target proteins. Furthermore, molecular geometry was performed, and the frontier molecular orbitals, Mulliken charges and molecular electron density distribution were evaluated using density functional theory. Also, the bioactivity parameters of the compounds were evaluated, and ADME analysis was performed using web-based tools.
Results:
Higher binding affinity was observed for Zn(II) complex with target proteins vascular endothelial growth factor receptor 2 and against epidermal growth factor receptor when compared with LH2. Only the Zn(II) complex against the epidermal growth factor receptor had ligand efficiency and fit quality in the valid range. Furthermore, LH2 has the most potent electrophilic ability (acceptor) among other compounds. Moreover, both LH2 and Zn(II) complexes strongly satisfy Lipinski's rule of five.
Conclusion:
In conclusion, these novel compounds, especially Zn(II) complex, can be new candidates for anticancer drug development studies which are target-focused and have low toxicity.
Insights
Novel vic-dioxime derivatives and their Zn(II) complex show promise as targeted, low-toxicity anticancer drugs. The Zn(II) complex demonstrated significant binding affinity to key cancer-related proteins, suggesting potential for drug development.
Area of Science:
- Medicinal Chemistry
- Computational Chemistry
- Drug Discovery
Background:
- Cancer remains a leading global cause of death, necessitating the development of novel, targeted therapies with reduced toxicity.
- Identifying new anti-cancer agents with improved efficacy and safety profiles is a critical area of research.
Purpose of the Study:
- To evaluate the anti-cancer potential of novel vic-dioxime derivatives with a hydrazone group and their corresponding Zinc(II) complex.
- To utilize molecular docking, bioactivity, and quantum chemical calculations to assess their interaction with cancer-related targets.
Main Methods:
- Molecular docking simulations were conducted against epidermal growth factor receptor (EGFR) and vascular endothelial growth factor receptor 2 (VEGFR2).
- Density Functional Theory (DFT) was employed for molecular geometry optimization, frontier molecular orbital analysis, Mulliken charge distribution, and electron density mapping.
- In silico evaluation of bioactivity parameters and Absorption, Distribution, Metabolism, and Excretion (ADME) properties was performed.
Main Results:
- The Zn(II) complex exhibited higher binding affinity towards VEGFR2 and EGFR compared to the parent ligand (LH2).
- The Zn(II) complex demonstrated favorable ligand efficiency and fit quality for EGFR.
- Both LH2 and its Zn(II) complex satisfied Lipinski's Rule of Five, indicating good oral bioavailability potential.
Conclusions:
- The investigated vic-dioxime derivatives, particularly the Zn(II) complex, represent promising candidates for the development of targeted and low-toxicity anticancer drugs.
- These compounds warrant further investigation in preclinical and clinical studies for their therapeutic potential against cancer.
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