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Updated: Jul 13, 2025

Kinase Inhibitor Screening In Self-assembled Human Protein Microarrays
Published on: October 23, 2019
Excessive concentrations of kinase inhibitors in translational studies impede effective drug repurposing
Chuan Liu1, Scott M Leighow2, Kyle McIlroy2
1Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USA; Department of Oncology, Shanghai General Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200080, China.
Abstract:
Drug repositioning seeks to leverage existing clinical knowledge to identify alternative clinical settings for approved drugs. However, repositioning efforts fail to demonstrate improved success rates in late-stage clinical trials. Focusing on 11 approved kinase inhibitors that have been evaluated in 139 repositioning hypotheses, we use data mining to characterize the state of clinical repurposing. Then, using a simple experimental correction with human serum proteins in in vitro pharmacodynamic assays, we develop a measurement of a drug's effective exposure. We show that this metric is remarkably predictive of clinical activity for a panel of five kinase inhibitors across 23 drug variant targets in leukemia. We then validate our model's performance in six other kinase inhibitors for two types of solid tumors: non-small cell lung cancer (NSCLC) and gastrointestinal stromal tumors (GISTs). Our approach presents a straightforward strategy to use existing clinical information and experimental systems to decrease the clinical failure rate in drug repurposing studies.
Insights
Drug repositioning can be improved by measuring effective drug exposure. This new metric predicts clinical success for kinase inhibitors in leukemia and solid tumors, reducing late-stage trial failures.
Area of Science:
- Pharmacology and Drug Discovery
- Oncology and Cancer Research
- Translational Medicine
Background:
- Drug repositioning aims to find new uses for existing drugs, but often faces high failure rates in late-stage clinical trials.
- Kinase inhibitors are a key class of drugs, with many evaluated for repositioning across various diseases.
Purpose of the Study:
- To develop a predictive metric for drug repositioning success by measuring effective drug exposure.
- To reduce the clinical failure rate in drug repurposing studies for kinase inhibitors.
Main Methods:
- Data mining was used to analyze 139 repositioning hypotheses for 11 approved kinase inhibitors.
- An in vitro pharmacodynamic assay was developed, incorporating human serum proteins to measure effective drug exposure.
- The predictive power of this metric was validated across multiple kinase inhibitors and cancer types (leukemia, NSCLC, GISTs).
Main Results:
- The developed metric of effective drug exposure was highly predictive of clinical activity for five kinase inhibitors in leukemia.
- Model performance was further validated in six additional kinase inhibitors for non-small cell lung cancer (NSCLC) and gastrointestinal stromal tumors (GISTs).
- The approach demonstrated a significant improvement in predicting clinical efficacy compared to traditional repositioning efforts.
Conclusions:
- Measuring effective drug exposure using a corrected in vitro assay is a straightforward and effective strategy to improve drug repositioning success.
- This method can decrease the clinical failure rate, making drug repurposing a more reliable strategy for developing new cancer therapies.
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