Cell-autonomous effects of APOE4 in restricting microglial response in brain homeostasis and Alzheimer's disease

Chia-Chen Liu1,2, Na Wang3,4, Yuanxin Chen3

  • 1Department of Neuroscience, Mayo Clinic, Jacksonville, FL, USA. liu.chiachenjen@gmail.com.

Nature Immunology
|October 19, 2023
PubMed

Insights

Apolipoprotein E4 (APOE4) in microglia worsens Alzheimer's disease (AD) pathology and cognitive decline. Microglial APOE3, however, improves brain function and reduces amyloid plaques, highlighting isoform-specific effects in AD.

Area of Science:

  • Neuroscience
  • Immunology
  • Genetics

Background:

  • Microglial cells play a crucial role in Alzheimer's disease (AD) pathogenesis.
  • Apolipoprotein E (APOE) is a known risk factor for AD, but its specific role within microglia is not fully understood.
  • Understanding microglial APOE function is key to deciphering AD risk associated with APOE isoforms.

Purpose of the Study:

  • To investigate the cell-autonomous effects of apolipoprotein E (APOE) isoforms expressed in microglia and central nervous system-associated macrophages (CAMs) on brain cognition and Alzheimer's disease (AD) pathology.
  • To elucidate the molecular mechanisms underlying APOE isoform-dependent microglial function in the context of AD.
  • To determine how microglial APOE4 exacerbates AD pathology compared to APOE3.

Main Methods:

  • Utilized conditional mouse models expressing specific APOE isoforms (APOE3, APOE4) in microglia and CAMs.
  • Assessed cognitive function, amyloid plaque load, and associated toxicity in the mouse models.
  • Performed single-cell transcriptomic profiling to analyze microglial responses.
  • Examined lipid metabolism and microglial markers in human brain samples and iPSC-derived microglia.

Main Results:

  • Microglial APOE3 expression improved cognitive function, increased microglia around amyloid plaques, and reduced amyloid pathology and toxicity.
  • Microglial APOE4 expression impaired lipid metabolism, leading to compromised or no beneficial effects on cognition and pathology.
  • Single-cell RNA sequencing revealed APOE3 upregulated antigen presentation and interferon pathways, while APOE4 downregulated complement/lysosomal pathways and increased stress responses.
  • Microglial APOE4 exacerbated amyloid pathology in the presence of endogenous mouse APOE.
  • Human APOE4 brains and iPSC-derived microglia showed reduced responsive microglia and increased lipid droplet accumulation.

Conclusions:

  • Microglia-specific APOE isoforms exert critical, cell-autonomous effects on brain function and AD pathology.
  • APOE3 in microglia/CAMs is neuroprotective, whereas APOE4 is detrimental, largely due to impaired lipid metabolism and altered immune responses.
  • These findings provide novel insights into how APOE4 significantly elevates AD risk and suggest potential therapeutic targets within microglial pathways.