Ligand Sulfur Oxidation State Progressively Alters Galectin-3-Ligand Complex Conformations To Induce
Mukul Mahanti1, Kumar Bhaskar Pal1, Rohit Kumar2
1Department of Chemistry, Lund University, Box 124, SE-221 00 Lund, Sweden.
Journal of Medicinal Chemistry
|October 25, 2023
Summary
Researchers modified galectin-3 ligands by altering sulfur oxidation states. The sulfone derivative significantly enhanced binding affinity through multiple hydrogen bonds, impacting immune regulation and tumor progression research.
Area of Science:
- Biochemistry
- Molecular Biology
- Medicinal Chemistry
Background:
- Galectins, particularly galectin-3, are crucial in immune regulation and tumor progression.
- High-affinity ligands for galectin-3 typically involve galactose cores and aryltriazole moieties, utilizing hydrophobic and π-stacking interactions.
Purpose of the Study:
- To design and synthesize novel thiogalactoside derivatives with varying sulfur oxidation states (sulfide, sulfoxide, sulfone).
- To investigate how these structural modifications influence ligand binding affinity and interaction modes with galectin-3.
- To explore the impact of hydrogen bonding, hydrophobic, and π-interactions on ligand-protein complex structure and thermodynamics.
Main Methods:
- Chemical synthesis of phenyl sulfone, sulfoxide, and sulfide-triazolyl thiogalactoside derivatives.
- X-ray crystallography to determine the structures of ligand-protein complexes.
- Thermodynamic analyses (e.g., isothermal titration calorimetry) to quantify binding affinities and energetics.
Main Results:
- Sulfoxide and sulfone ligands formed hydrogen bonds while maintaining π-interactions, leading to altered binding poses and improved affinities.
- The sulfoxide derivative showed decreased affinity compared to the sulfide.
- The sulfone derivative, forming three hydrogen bonds (two direct, one water-mediated), significantly increased binding affinity and altered the complex structure.
Conclusions:
- The oxidation state of sulfur in triazolyl thiogalactoside derivatives critically modulates interactions with galectin-3.
- Enhanced hydrogen bonding, particularly in the sulfone derivative, is key to increasing binding affinity and altering complex formation.
- These findings provide insights into designing potent galectin-3 inhibitors for therapeutic applications in immune and cancer biology.
Related Concept Videos
Complexation Equilibria: Factors Influencing Stability of Complexes
382
In complexation reactions, metal cations are the electron pair acceptors, and the ligands are the electron pair donors. The stability of the metal complexes depends primarily on the complexing ability of the central metal ion and the nature of the ligands. Generally, the complexing ability of the metal ion depends on the size and charge of the ion. As the metal ion size increases, the stability of the metal complexes decreases, provided that the valency of the metal ion and the ligands remain...
382
Complexation Equilibria: The Chelate Effect
525
In complexation reactions, metal atoms or cations interact with ligands to form donor-acceptor adducts called metal complexes. Ligands that bind through one donor site are monodentate, ligands with two donor sites are bidentate, and those with more than two donor sites are polydentate ligands. For example, ethylene diamine is a bidentate ligand that binds through two nitrogen donor atoms, forming a five-membered ring. EDTA is a polydentate ligand that binds through four oxygen and two nitrogen...
525
Metal-Ligand Bonds
20.8K
The hemoglobin in the blood, the chlorophyll in green plants, vitamin B-12, and the catalyst used in the manufacture of polyethylene all contain coordination compounds. Ions of the metals, especially the transition metals, are likely to form complexes.
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
20.8K
Coordination Number and Geometry
15.9K
For transition metal complexes, the coordination number determines the geometry around the central metal ion. Table 1 compares coordination numbers to molecular geometry. The most common structures of the complexes in coordination compounds are octahedral, tetrahedral, and square planar.
15.9K
Ladder Diagrams: Complexation Equilibria
355
Ladder diagrams are useful for evaluating equilibria involving metal-ligand complexes. The vertical scale of the ladder diagram represents the concentration of unreacted or free ligand, pL. The horizontal lines on the scale depict the log of stepwise formation constants for metal-ligand complexes and indicate the dominant species in all the regions.
The formation constant, K1, for the formation of Cd(NH3)2+ complex from cadmium and ammonia is 3.55 × 102. Log K1 (i.e. pNH3) is 2.55, and...
The formation constant, K1, for the formation of Cd(NH3)2+ complex from cadmium and ammonia is 3.55 × 102. Log K1 (i.e. pNH3) is 2.55, and...
355
Formation of Complex Ions
23.7K
A type of Lewis acid-base chemistry involves the formation of a complex ion (or a coordination complex) comprising a central atom, typically a transition metal cation, surrounded by ions or molecules called ligands. These ligands can be neutral molecules like H2O or NH3, or ions such as CN− or OH−. Often, the ligands act as Lewis bases, donating a pair of electrons to the central atom. These types of Lewis acid-base reactions are examples of a broad subdiscipline called coordination...
23.7K


