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Applying Natural Language Processing to Single-Report Prediction of Metastatic Disease Response Using the OR-RADS

Lydia Elbatarny1, Richard K G Do2, Natalie Gangai2

  • 1School of Computing, Queen's University, Kingston, ON K7L 2N8, Canada.

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|October 28, 2023
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Summary

This study shows that a Natural Language Processing (NLP) model using the standardized Oncologic Response-Radiology Reporting and Data System (OR-RADS) lexicon can accurately predict cancer treatment response from radiological reports, exceeding human performance.

Keywords:
computed tomographydisease progressionmetastasisnatural language processingradiology

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Area of Science:

  • Oncology
  • Radiology
  • Natural Language Processing
  • Artificial Intelligence

Background:

  • Standardized reporting of cancer treatment response in radiological reports is crucial for collecting Real-World Evidence (RWE).
  • Current lack of standardization hinders large-scale interpretation of disease response and personalized treatment development.

Purpose of the Study:

  • To evaluate the utility of Natural Language Processing (NLP) for large-scale interpretation of disease response using a standardized oncologic response lexicon (OR-RADS).
  • To assess the performance of a Bidirectional Encoder Representations from Transformers (BERT) model in classifying cancer treatment response based on radiological reports.

Main Methods:

  • Radiologists annotated 3503 radiological reports with one of seven OR-RADS categories.
  • A BERT model was trained on the annotated dataset for multiclass and single-class classification of disease response.
  • Human performance was compared against the BERT model's performance.

Main Results:

  • The BERT model achieved high accuracies (95-99%) across all classification tasks, outperforming human performance (74-93%).
  • The model demonstrated superior performance in single-class tasks compared to multiclass tasks.
  • Misclassifications by the model were minimal, primarily involving overprediction of equivocal and mixed response categories.

Conclusions:

  • The BERT NLP model is feasible for predicting cancer patient disease response from radiological reports, demonstrating performance superior to human readers.
  • Adoption of the standardized OR-RADS lexicon can enhance the accuracy of large-scale RWE collection for cancer treatment effectiveness.