Identification and Characterization of a Novel Hypovirus from the Phytopathogenic Fungus Botryosphaeria dothidea
Yongqi Wen1, Jinyue Qu1, Honglin Zhang1
1College of Life Science and Biotechnology, Yangtze Normal University, Chongqing 408100, China.
Abstract:
Many mycoviruses have been accurately and successfully identified in plant pathogenic fungus Botryosphaeria dothidea. This study discovered three mycoviruses from a B. dothidea strain SXD111 using high-throughput sequencing technology. A novel hypovirus was tentatively named Botryosphaeria dothidea hypovirus 1 (BdHV1/SXD111). The other two were known viruses, which we named Botryosphaeria dothidea polymycovirus 1 strain SXD111 (BdPmV1/SXD111) and Botryosphaeria dothidea partitivirus 1 strain SXD111 (BdPV1/SXD111). The genome of BdHV1/SXD111 is 11,128 nucleotides long, excluding the poly (A) tail. A papain-like cysteine protease (Pro), a UDP-glucose/sterol glucosyltransferase (UGT), an RNA-dependent RNA polyprotein (RdRp), and a helicase (Hel) were detected in the polyprotein of BdHV1/SXD111. Phylogenetic analysis showed that BdHV1/SXD111 was clustered with betahypovirus and separated from members of the other genera in the family Hypoviridae. The BdPmV1/SXD111 genome comprised five dsRNA segments with 2396, 2232, 1967, 1131, and 1060 bp lengths. Additionally, BdPV1/SXD111 harbored three dsRNA segments with 1823, 1623, and 557 bp lengths. Furthermore, the smallest dsRNA was a novel satellite component of BdPV1/SXD111. BdHV1/SXD111 could be transmitted through conidia and hyphae contact, whereas it likely has no apparent impact on the morphologies and virulence of the host fungus. Thus, this study is the first report of a betahypovirus isolated from the fungus B. dothidea. Importantly, our results significantly enhance the diversity of the B. dothidea viruses.
Insights
This study identified three mycoviruses, including a novel hypovirus (Botryosphaeria dothidea hypovirus 1), in the plant pathogenic fungus Botryosphaeria dothidea. These findings expand the known diversity of B. dothidea viruses.
Area of Science:
- Mycology
- Virology
- Plant Pathology
Background:
- Botryosphaeria dothidea is a significant plant pathogenic fungus.
- Mycoviruses are increasingly identified in fungal hosts, influencing their biology.
- Understanding the viral landscape of B. dothidea is crucial for disease management.
Purpose of the Study:
- To discover and characterize mycoviruses infecting Botryosphaeria dothidea.
- To identify novel viral species and strains within B. dothidea.
- To investigate the phylogenetic relationships and potential impact of these mycoviruses.
Main Methods:
- High-throughput sequencing was employed to identify mycoviruses in B. dothidea strain SXD111.
- Genome sequencing and assembly were performed for the identified viruses.
- Phylogenetic analyses were conducted to determine viral relationships.
- Transmission experiments and phenotypic observations were used to assess viral impact.
Main Results:
- Three mycoviruses were identified: a novel hypovirus (Botryosphaeria dothidea hypovirus 1, BdHV1/SXD111), Botryosphaeria dothidea polymycovirus 1 strain SXD111 (BdPmV1/SXD111), and Botryosphaeria dothidea partitivirus 1 strain SXD111 (BdPV1/SXD111).
- The genome of BdHV1/SXD111 contains genes for protease, glucosyltransferase, RdRp, and helicase; phylogenetic analysis places it within the Betahypovirus genus.
- BdPmV1/SXD111 has five dsRNA segments, and BdPV1/SXD111 has three dsRNA segments, including a novel satellite component.
- BdHV1/SXD111 is transmissible via conidia and hyphal contact but shows no apparent effect on host morphology or virulence.
Conclusions:
- This study reports the first isolation of a betahypovirus from B. dothidea.
- The discovery of these three mycoviruses significantly broadens the known viral diversity in B. dothidea.
- The findings contribute to a better understanding of virus-fungus interactions in plant pathogens.
More Related Videos
06:53Isolation, Characterization, and Total DNA Extraction to Identify Endophytic Fungi in Mycoheterotrophic Plants
Published on: May 5, 2023
11:12Protocols for Investigating the Host-tissue Distribution, Transmission-mode, and Effect on the Host Fitness of a Densovirus in the Cotton Bollworm
Published on: April 12, 2017
Related Concept Videos
Fungal Phylum Microsporidia
Fungal Group Zygomycota
Subviral Agents
Fungal Phylum Basidiomycota
