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Probable digenic inheritance of Diamond-Blackfan anemia.
Yutaka Furuta1, Rory J Tinker1, Alican Gulsevin2,3
1Department of Pediatrics, Division of Medical Genetics and Genomic Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
American Journal of Medical Genetics. Part A
|October 28, 2023
Summary
Diamond-Blackfan anemia (DBA) is typically caused by single gene variants. This study identified a rare DBA case resulting from digenic inheritance of RPS19 and RPL27 variants, confirmed by machine learning.
Area of Science:
- Genetics
- Hematology
- Computational Biology
Background:
- Diamond-Blackfan anemia (DBA) is a rare genetic disorder characterized by bone marrow failure.
- DBA is classically linked to monoallelic variants in ribosomal protein genes, exhibiting autosomal dominant or recessive inheritance patterns.
Observation:
- A 26-year-old female with a Diamond-Blackfan anemia phenotype lacked an identified genotype through standard genetic analysis.
- Referral to the Undiagnosed Diseases Network led to the investigation of a complex genetic interaction.
Findings:
- Digenic inheritance involving non-allelic variants in RPS19 and RPL27 was identified as the cause of DBA in this proband.
- Machine learning structural modeling, co-segregation analysis, and RNA sequencing confirmed the digenic interaction.
- This represents the first report of DBA caused by digenic variants in non-allelic genes, validated by a machine learning structural model.
Implications:
- Atypical DBA presentations may arise from digenic inheritance, expanding the known genetic mechanisms of the disorder.
- Machine learning models can detect digenic interactions between variants in different genes, revealing complex inheritance patterns.
- This finding highlights a potential 25% recurrence risk in families with non-affected carrier parents due to digenic inheritance.
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